Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- peroxisome 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96897 | Canola | peroxisome | 41.35 | 24.71 |
| KRH42558 | Soybean | peroxisome | 42.31 | 21.46 |
| Solyc03g122140.2.1 | Tomato | peroxisome | 69.23 | 19.83 |
| Solyc03g122170.2.1 | Tomato | peroxisome | 65.38 | 19.83 |
| Solyc03g122130.2.1 | Tomato | peroxisome | 64.42 | 19.53 |
| KRH58657 | Soybean | peroxisome, plastid | 54.81 | 19.13 |
| KRH42554 | Soybean | peroxisome | 49.04 | 16.83 |
| KRH42553 | Soybean | endoplasmic reticulum | 54.81 | 15.49 |
| KRH42555 | Soybean | endoplasmic reticulum | 54.81 | 15.41 |
| KRH42560 | Soybean | peroxisome | 52.88 | 15.03 |
| KRH58663 | Soybean | peroxisome | 52.88 | 14.95 |
| Solyc07g056540.2.1 | Tomato | plastid | 50.96 | 14.29 |
| Solyc10g007600.2.1 | Tomato | plastid | 50.96 | 14.29 |
| Solyc08g048250.2.1 | Tomato | nucleus | 51.92 | 14.25 |
| KRH42559 | Soybean | cytosol | 2.88 | 9.68 |
| Solyc03g122150.2.1 | Tomato | peroxisome | 10.58 | 7.19 |
Protein Annotations
| EnsemblPlants:Solyc03g122160.1.1 | EnsemblPlantsGene:Solyc03g122160.1 | Gene3D:3.20.20.70 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Aldolase_TIM | InterPro:FMN-dep_DH | InterPro:FMN_hydac_DH_AS |
| InterPro:IPR013785 | PANTHER:PTHR10578 | PANTHER:PTHR10578:SF102 | PFAM:PF01070 | ScanProsite:PS00557 | SUPFAM:SSF51412 |
| UniParc:UPI00027657D6 | UniProt:K4BN14 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3:+:70086982..70087872
Molecular Weight (calculated)
11241.5 Da
IEP (calculated)
7.510
GRAVY (calculated)
-0.043
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MIAPQLKNFE GHLSTKVISE KAYAAETLDR SFCWKLPSLL KGILTSEDAI KAIEAGVAGI IVSNHGARQL DYTPTTFSVL EEIGRPVIYG LAAKGKTSYS
101: NAQE
101: NAQE
001: MSSCTFEEIA SSCNAVRFLQ IYVYKRRDIT AQVVKRAEKA GFKAIVLTVD VPRLGRREAD IKNKMISPQL KNFEGLFSTE VRPSKGSGVQ AFASRAFDAS
101: FSWKDIEWLR SITELPILVK GILTREDALK AVEAGVDGII VSNHGGRQLD YSPATITVLE EVVQVVRGRI PVLLDGGVRR GTDVFKALAL GAQAVLIGRP
201: IIYGLAAKGE DGVKKVIDML KNEFEITMAL SGCPTIDDIT RNHVRTENER LHSML
101: FSWKDIEWLR SITELPILVK GILTREDALK AVEAGVDGII VSNHGGRQLD YSPATITVLE EVVQVVRGRI PVLLDGGVRR GTDVFKALAL GAQAVLIGRP
201: IIYGLAAKGE DGVKKVIDML KNEFEITMAL SGCPTIDDIT RNHVRTENER LHSML
Arabidopsis Description
GLO3HAOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC7]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.