CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42559	Soybean	cytosol	9.9	96.77
KRH42558	Soybean	peroxisome	57.1	84.39
KRH25749	Soybean	vacuole	19.8	71.43
KRH42555	Soybean	endoplasmic reticulum	84.82	69.46
KRH58663	Soybean	peroxisome	82.84	68.21
KRH42553	Soybean	endoplasmic reticulum	82.84	68.21
KRH42560	Soybean	peroxisome	81.85	67.76
PGSC0003DMT400019434	Potato	peroxisome	77.23	63.59
KRH13608	Soybean	nucleus	77.56	63.34
KRH43857	Soybean	peroxisome	77.23	63.07
KRH58657	Soybean	peroxisome, plastid	61.39	62.42
Bra012602.1-P	Field mustard	peroxisome	75.58	62.23
AT4G18360.4	Thale cress	peroxisome	75.58	62.23
Bra013299.1-P	Field mustard	peroxisome	73.27	60.66
PGSC0003DMT400054730	Potato	peroxisome	74.26	60.65
Solyc03g122160.1.1	Tomato	cytosol, nucleus, peroxisome	16.83	49.04
CDX96897	Canola	peroxisome	19.47	33.91

Protein Annotations

EntrezGene:100798419	Gene3D:3.20.20.70	MapMan:50.1.1	UniProt:A0A0R0IJM4	EMBL:ACUP02004813	InterPro:Aldolase_TIM
InterPro:Alpha-hydoxy_acid_DH_FMN	InterPro:FMN-dep_DH	InterPro:FMN_HAD	EnsemblPlantsGene:GLYMA_08G096700	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396	EnsemblPlants:KRH42554	ProteinID:KRH42554	ProteinID:KRH42554.1
PFAM:PF01070	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF103	SUPFAM:SSF51395	UniParc:UPI0006EE1B40

Description

hypothetical protein

Coordinates

chr8:-:7411852..7416882

Molecular Weight (calculated)

33391.8 Da

IEP (calculated)

5.463

GRAVY (calculated)

0.120

Length

303 amino acids

Sequence
(BLAST)

001: MKMDMITNVT EYEAIAKENL PKMVYDFYAS GAEDQWTLKE NRNAFSRILF RLRILVDLSK IDLTTTVLGF KISMPIMIAP TAKQKMAHPE GELDTARAAS
101: AAGTIMTLSS TATSSVEEVA STGPGIHFFN FITQCYIAMA IALTVDTPVL GRREADIKNR FTLPPNMVFK NFERLDLGKL DKTRDSVVTT YVAGLFDRSL
201: NWKDIKWLLT ITSSPILLKG VLTVEDTRVA IQAGAAEIIV SNQGARQLDY APATIMALEE IGRPVMFSLA ADGEAGVRKV LQMLVDELEV TMALSGCHSL
301: KEI

Best Arabidopsis Sequence Match ( AT3G14420.1 )
(BLAST)

001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL

Arabidopsis Description

GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.