CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42555	Soybean	endoplasmic reticulum	95.11	94.59
KRH42560	Soybean	peroxisome	92.93	93.44
KRH42553	Soybean	endoplasmic reticulum	90.76	90.76
KRH58657	Soybean	peroxisome, plastid	71.47	88.25
KRH42558	Soybean	peroxisome	48.91	87.8
KRH42559	Soybean	cytosol	7.34	87.1
KRH13608	Soybean	nucleus	85.33	84.64
KRH43857	Soybean	peroxisome	85.05	84.37
AT4G18360.4	Thale cress	peroxisome	83.42	83.42
Bra012602.1-P	Field mustard	peroxisome	82.88	82.88
KRH42554	Soybean	peroxisome	68.21	82.84
PGSC0003DMT400019434	Potato	peroxisome	82.07	82.07
PGSC0003DMT400054730	Potato	peroxisome	81.52	80.86
Bra013299.1-P	Field mustard	peroxisome	79.62	80.05
KRH25749	Soybean	vacuole	15.49	67.86
Solyc03g122160.1.1	Tomato	cytosol, nucleus, peroxisome	14.95	52.88
CDX96897	Canola	peroxisome	22.55	47.7

Protein Annotations

MapMan:1.3.2	EntrezGene:100782977	Gene3D:3.20.20.70	EMBL:ACUP02003280	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN
InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	EnsemblPlantsGene:GLYMA_05G141400	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	UniProt:I1K3F6	InterPro:IPR013785	InterPro:IPR037396	EnsemblPlants:KRH58663	ProteinID:KRH58663
ProteinID:KRH58663.1	ProteinID:KRH58664.1	PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349
PANTHER:PTHR10578	PANTHER:PTHR10578:SF103	SUPFAM:SSF51395	UniParc:UPI000233954E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:33476290..33481071

Molecular Weight (calculated)

40161.0 Da

IEP (calculated)

8.624

GRAVY (calculated)

0.097

Length

368 amino acids

Sequence
(BLAST)

001: MEMITNVTEY EAIAKEKLPK MVYDYYASGA EDQWTLNENR NAFSRILFRP RILVDVSKID LTTTVLGFKI SMPIMIAPTA MQKLAHPEGE LATARAASAA
101: GTIMTLSSCA SSSVEEVAST GSDIRFFQLY VLKDRNVVAQ LVRRAERAGF KAIALTVDTP ILGHREADIK NRLTLPLNLV LKNFEGLDLG KLDKTSDSGL
201: ASYVAGQIDP SLNWKDIKWL QSITSLPILV KGVLTVEDTR IAIQAGAAGI IVSNHGARQL DYVPATIMAL EEVVKAAQGK IPVFLDSGIR RGTDVFKALA
301: LGAAGVFIGR PVVFSLAADG EAGVRKVLQM LRDELELTMA LSGCRSLKEI TRDHVVTEWD RPKFSPKL

Best Arabidopsis Sequence Match ( AT3G14420.1 )
(BLAST)

001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL

Arabidopsis Description

GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.