Factsheet for Bra013299.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99474	Canola	peroxisome	96.45	95.92
Bra012602.1-P	Field mustard	peroxisome	93.44	92.93
AT4G18360.4	Thale cress	peroxisome	92.08	91.58
Bra021555.1-P	Field mustard	peroxisome	76.5	80.69
KRH42559	Soybean	cytosol	6.83	80.65
KRH42555	Soybean	endoplasmic reticulum	80.87	80.0
Bra021556.1-P	Field mustard	peroxisome	80.05	79.84
KRH42560	Soybean	peroxisome	79.78	79.78
KRH58663	Soybean	peroxisome	80.05	79.62
PGSC0003DMT400054730	Potato	peroxisome	80.6	79.51
KRH42553	Soybean	endoplasmic reticulum	79.78	79.35
Bra027338.1-P	Field mustard	peroxisome	80.05	79.19
Bra001550.1-P	Field mustard	peroxisome	79.23	79.02
Solyc10g007600.2.1	Tomato	plastid	80.05	78.98
Bra001551.1-P	Field mustard	peroxisome	75.96	77.65
KRH58657	Soybean	peroxisome, plastid	62.84	77.18
Bra005793.1-P	Field mustard	peroxisome	24.32	76.07
KRH42558	Soybean	peroxisome	42.08	75.12
KRH42554	Soybean	peroxisome	60.66	73.27
Bra036980.1-P	Field mustard	peroxisome	9.84	63.16
Bra021533.1-P	Field mustard	peroxisome	59.29	59.78
Bra021535.1-P	Field mustard	peroxisome	59.02	59.5
Bra027339.1-P	Field mustard	peroxisome	75.14	58.64
Bra001536.1-P	Field mustard	peroxisome	56.01	56.79
Bra035032.1-P	Field mustard	mitochondrion	30.87	51.83
Bra027370.1-P	Field mustard	vacuole	55.19	20.18

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	EnsemblPlantsGene:Bra013299	EnsemblPlants:Bra013299.1
EnsemblPlants:Bra013299.1-P	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396	UniProt:M4D9Y9	PFAM:PF01070	PIRSF:PIRSF000138
ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF103	SUPFAM:SSF51395	UniParc:UPI0002546083

Description

AT4G18360 (E=3e-188) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative

Coordinates

chrA01:-:4852150..4854255

Molecular Weight (calculated)

40373.8 Da

IEP (calculated)

6.180

GRAVY (calculated)

-0.049

Length

366 amino acids

Sequence
(BLAST)

001: MEITNVMEYE KIAKEKLPKM VYDYYASGAE DQWTLQENRN AFSRILPRIL KDVSEIDVST RVLGFNISMP IMVAPTAMQK MAHPDGELAT ARATSAAGTI
101: MTLSTCATCS VEEVASTGPG IRFFQLYVYK DRNVVRQLVK RAEEAGFTAI ALTVDTPRFG RREADIKNRF ALPRDLTLKN FEGLDLGEID KTDGSWLASY
201: AASQVDQSLS WKDIKWLQSI TSLPIILKGV LTAEDARVAV EYGAAGIIVS NHGARQLDYV PPTIMALEEV VKAVEGRIPV FLDGGVRRGT DVFKALALGA
301: SGVFVGRPTL FSLAADGEAG VRKMLQMLRD ELELTMALSG CSSLREISRN HIKTDWDFPH YLPAKL

Best Arabidopsis Sequence Match ( AT4G18360.1 )
(BLAST)

001: MEITNVMEYE KIAKEKLPKM VYDYYASGAE DQWTLQENRN AFSRILFRPR ILIDVSKIDV STTVLGFNIS MPIMIAPTAM QKMAHPDGEL ATARATSAAG
101: TIMTLSSWAT CSVEEVASTG PGIRFFQLYV YKDRNVVIQL VKRAEEAGFK AIALTVDTPR LGRRESDIKN RFALPRGLTL KNFEGLDLGK IDKTNDSGLA
201: SYVAGQVDQS LSWKDIKWLQ SITSLPILVK GVITAEDARI AVEYGAAGII VSNHGARQLD YVPATIVALE EVVKAVEGRI PVFLDGGVRR GTDVFKALAL
301: GASGVFVGRP SLFSLAADGE AGVRKMLQML RDEFELTMAL SGCRSLREIS RTHIKTDWDT PHYLSAKL

Arabidopsis Description

GLO5Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [Source:UniProtKB/Swiss-Prot;Acc:O49506]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.