Factsheet for Bra001550.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82484	Canola	peroxisome	99.45	99.45
CDY25425	Canola	peroxisome	96.19	98.88
CDX81437	Canola	peroxisome	96.19	98.88
CDX68646	Canola	peroxisome	96.19	98.88
Bra021555.1-P	Field mustard	peroxisome	92.92	98.27
Bra021556.1-P	Field mustard	peroxisome	96.46	96.46
CDY40892	Canola	peroxisome	44.69	94.8
AT3G14415.2	Thale cress	peroxisome	95.91	94.37
Bra027338.1-P	Field mustard	peroxisome	95.1	94.32
Bra001551.1-P	Field mustard	peroxisome	91.28	93.58
Solyc07g056540.2.1	Tomato	plastid	91.83	90.84
PGSC0003DMT400071115	Potato	cytosol	90.46	89.49
KRH43857	Soybean	peroxisome	89.92	88.95
VIT_10s0003g03830.t01	Wine grape	peroxisome	89.1	87.9
KRH13608	Soybean	nucleus	88.83	87.87
Bra005793.1-P	Field mustard	peroxisome	27.79	87.18
Bra012602.1-P	Field mustard	peroxisome	84.47	84.24
Bra013299.1-P	Field mustard	peroxisome	79.02	79.23
GSMUA_Achr4P22900_001	Banana	peroxisome	32.97	78.57
Bra027339.1-P	Field mustard	peroxisome	89.37	69.94
Bra021533.1-P	Field mustard	peroxisome	59.95	60.61
Bra021535.1-P	Field mustard	peroxisome	59.67	60.33
Bra001536.1-P	Field mustard	peroxisome	56.4	57.34
Bra035032.1-P	Field mustard	mitochondrion	33.79	56.88
Bra036980.1-P	Field mustard	peroxisome	8.45	54.39
Bra027370.1-P	Field mustard	vacuole	56.13	20.58

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	EnsemblPlantsGene:Bra001550	EnsemblPlants:Bra001550.1
EnsemblPlants:Bra001550.1-P	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396	UniProt:M4CBH0	PFAM:PF01070	PIRSF:PIRSF000138
ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF80	SMART:SM01240	SUPFAM:SSF51395
UniParc:UPI000254096E	SEG:seg	:	:	:	:

Description

AT3G14415 (E=2e-189) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative

Coordinates

chrA03:+:16987906..16990065

Molecular Weight (calculated)

40462.0 Da

IEP (calculated)

9.402

GRAVY (calculated)

-0.076

Length

367 amino acids

Sequence
(BLAST)

001: MEITNVTEYE AIAKEKLPKM VYDYYASGAE DQWTLKENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPEGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK ANALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYFAGQIDRT LSWKDVQWLQ TITSMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLTEIT RNHIVTEWET PRHLPRL

Best Arabidopsis Sequence Match ( AT3G14415.1 )
(BLAST)

001: MEITNVTEYD AIAKAKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVNKIDM ATTVLGFKIS MPIMVAPTAF QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDIQWLQ TITNMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFALAAEGE AGVKKVLQML RDEFELTMAL SGCRSLSEIT RNHIVTEWDT PRHLPRL

Arabidopsis Description

GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.