Factsheet for Bra035032.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52449	Canola	mitochondrion	100.0	100.0
HORVU0Hr1G013900.4	Barley	peroxisome	53.67	35.78
Os07t0152900-01	Rice	peroxisome	57.34	33.88
Os03t0786100-01	Rice	peroxisome	57.34	33.88
Bra001550.1-P	Field mustard	peroxisome	56.88	33.79
Bra021556.1-P	Field mustard	peroxisome	56.88	33.79
Bra027338.1-P	Field mustard	peroxisome	57.34	33.78
EER93339	Sorghum	peroxisome	56.88	33.7
KXG34415	Sorghum	peroxisome	56.88	33.6
TraesCS5D01G432900.1	Wheat	peroxisome	55.96	32.97
TraesCS5B01G426500.1	Wheat	golgi	55.96	32.97
TraesCS5A01G424400.1	Wheat	peroxisome	55.96	32.97
TraesCS2D01G251800.2	Wheat	peroxisome, plastid	55.5	32.88
Bra012602.1-P	Field mustard	peroxisome	55.5	32.88
TraesCS2A01G250800.1	Wheat	peroxisome	55.5	32.88
Os08t0198700-01	Rice	vacuole	10.55	32.86
Bra005793.1-P	Field mustard	peroxisome	17.43	32.48
HORVU2Hr1G060010.5	Barley	peroxisome	55.5	32.44
TraesCS2B01G264100.2	Wheat	peroxisome, plastid	55.5	32.18
Bra021555.1-P	Field mustard	peroxisome	50.92	31.99
Bra001551.1-P	Field mustard	peroxisome	52.29	31.84
Bra013299.1-P	Field mustard	peroxisome	51.83	30.87
Zm00001d018810_P002	Maize	peroxisome, plastid	57.8	30.14
Bra027339.1-P	Field mustard	peroxisome	52.29	24.31
Os04t0623600-01	Rice	extracellular	10.55	23.47
Bra021533.1-P	Field mustard	peroxisome	36.24	21.76
Bra021535.1-P	Field mustard	peroxisome	35.78	21.49
Bra001536.1-P	Field mustard	peroxisome	33.49	20.22
HORVU2Hr1G060070.1	Barley	peroxisome	14.22	19.75
Bra027370.1-P	Field mustard	vacuole	36.24	7.89
Bra036980.1-P	Field mustard	peroxisome	0.46	1.75

Protein Annotations

EnsemblPlants:Bra035032.1	EnsemblPlants:Bra035032.1-P	EnsemblPlantsGene:Bra035032	Gene3D:3.20.20.70	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Aldolase_TIM	InterPro:FMN-dep_DH
InterPro:FMN_HAD	InterPro:IPR013785	InterPro:IPR037396	PANTHER:PTHR10578	PANTHER:PTHR10578:SF103	PFAM:PF01070
PFscan:PS51349	SUPFAM:SSF51395	UniParc:UPI0002541BF5	UniProt:M4F1T5	MapMan:35.1	:

Description

AT3G14420 (E=2e-027) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative

Coordinates

chrA07:+:21861519..21863533

Molecular Weight (calculated)

24181.5 Da

IEP (calculated)

10.279

GRAVY (calculated)

-0.019

Length

218 amino acids

Sequence
(BLAST)

001: MWRVKIYRFT VVDENRNLRV NRIRLEKQTG SCSLTKQNLV SIYCNEGFGL GIKQDRYATT VLGFKISMST MVAPTAMQKM AHPEEGCSIT KLLLQTLSSW
101: ATSSVEEVGS TGPGIRFFQL YVSSMARYNY SLMNVVAQLV RRTESAGFKA IALTANDSGL ASYVAGQIDR TLSWKDVKWL QKITNLPLLV KGVLTAEDAR
201: MAVQTGAASI IVFNHGPR

Best Arabidopsis Sequence Match ( AT3G14420.1 )
(BLAST)

001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL

Arabidopsis Description

GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.