Factsheet for Bra027339.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
EpiLoc:	peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021555.1-P	Field mustard	peroxisome	67.59	91.35
CDX97573	Canola	peroxisome	72.71	89.5
Bra001550.1-P	Field mustard	peroxisome	69.94	89.37
Bra021556.1-P	Field mustard	peroxisome	69.72	89.1
Bra027338.1-P	Field mustard	peroxisome	69.3	87.84
AT3G14415.2	Thale cress	peroxisome	69.3	87.13
Bra001551.1-P	Field mustard	peroxisome	66.1	86.59
Bra005793.1-P	Field mustard	peroxisome	21.32	85.47
Solyc07g056540.2.1	Tomato	plastid	66.1	83.56
KRH43857	Soybean	peroxisome	65.67	83.02
PGSC0003DMT400071115	Potato	cytosol	65.46	82.75
KRH13608	Soybean	nucleus	64.61	81.67
VIT_10s0003g03830.t01	Wine grape	peroxisome	64.61	81.45
Bra012602.1-P	Field mustard	peroxisome	62.47	79.62
Bra013299.1-P	Field mustard	peroxisome	58.64	75.14
GSMUA_Achr4P22900_001	Banana	peroxisome	23.45	71.43
Bra021533.1-P	Field mustard	peroxisome	44.56	57.58
Bra021535.1-P	Field mustard	peroxisome	43.92	56.75
Bra001536.1-P	Field mustard	peroxisome	42.0	54.57
Bra036980.1-P	Field mustard	peroxisome	6.61	54.39
Bra035032.1-P	Field mustard	mitochondrion	24.31	52.29
Bra027370.1-P	Field mustard	vacuole	41.58	19.48

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	EnsemblPlantsGene:Bra027339	EnsemblPlants:Bra027339.1
EnsemblPlants:Bra027339.1-P	InterPro:FMN-dep_DH	InterPro:FMN_HAD	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:IPR013785	InterPro:IPR037396	UniProt:M4EEX7	PFAM:PF01070	PFscan:PS51349	PANTHER:PTHR10578
PANTHER:PTHR10578:SF103	SUPFAM:SSF51395	UniParc:UPI0002547DC2	SEG:seg	:	:

Description

AT3G14420 (E=4e-091) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative

Coordinates

chrA05:-:20410987..20415888

Molecular Weight (calculated)

51883.4 Da

IEP (calculated)

9.807

GRAVY (calculated)

-0.200

Length

469 amino acids

Sequence
(BLAST)

001: MEITNVNEYE AIAKEKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVTKIDM TTTILGFKIS MPIMVAPTAM QKMAHPEGEL ATARASSAAG
101: TIMTLSSWTT SSVEEVASTG PGIRFFQIRF FQLQVYKNRK VVEQLVRRAE RAGFKAIVLT GDAPRLGRRE SDIKNRFTLP PNLALKNFEG LDHGKIDELI
201: IIKYYPANDS GLASYAGGQI DRTLSWKDVQ WLQTITNMPI LVKGVLTGED GQLLLSSCSK DSDSGWSSRD HCIKPCSFGY RSAAVSASAA AAAPMKTVVV
301: RFANANADAA KDYCSFRRRR KLSFYRRQPF GRGVFLRQRN EQELTQNVDA AAGTCGNQTN SPYVPATISA LEEAVKATQG RVPVFLDGGV RRGTDVFKAL
401: ALGASGIFIG RPVVFSLAAE GEAGVRKVLQ MLRDEFELTM ALSGCRSLSE ITRNHIVTEW DTPRHLPKL

Best Arabidopsis Sequence Match ( AT3G14415.1 )
(BLAST)

001: MEITNVTEYD AIAKAKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVNKIDM ATTVLGFKIS MPIMVAPTAF QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDIQWLQ TITNMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFALAAEGE AGVKKVLQML RDEFELTMAL SGCRSLSEIT RNHIVTEWDT PRHLPRL

Arabidopsis Description

GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.