Factsheet for Bra005793.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021555.1-P	Field mustard	peroxisome	88.03	29.68
CDX98451	Canola	peroxisome	76.07	29.09
Bra001550.1-P	Field mustard	peroxisome	87.18	27.79
Bra021556.1-P	Field mustard	peroxisome	87.18	27.79
Bra027338.1-P	Field mustard	peroxisome	86.32	27.3
KRH43857	Soybean	peroxisome	82.91	26.15
AT3G14415.2	Thale cress	peroxisome	82.91	26.01
Solyc07g056540.2.1	Tomato	plastid	81.2	25.61
KRH13608	Soybean	nucleus	81.2	25.61
Bra012602.1-P	Field mustard	peroxisome	80.34	25.54
VIT_10s0003g03830.t01	Wine grape	peroxisome	81.2	25.54
PGSC0003DMT400071115	Potato	cytosol	79.49	25.07
Bra013299.1-P	Field mustard	peroxisome	76.07	24.32
Bra001551.1-P	Field mustard	peroxisome	74.36	24.3
Bra027339.1-P	Field mustard	peroxisome	85.47	21.32
Bra021535.1-P	Field mustard	peroxisome	58.12	18.73
Bra021533.1-P	Field mustard	peroxisome	58.12	18.73
Bra001536.1-P	Field mustard	peroxisome	53.85	17.45
Bra035032.1-P	Field mustard	mitochondrion	32.48	17.43
Bra027370.1-P	Field mustard	vacuole	58.12	6.79
Bra036980.1-P	Field mustard	peroxisome	2.56	5.26
GSMUA_Achr4P22900_001	Banana	peroxisome	5.13	3.9

Protein Annotations

EnsemblPlants:Bra005793.1	EnsemblPlants:Bra005793.1-P	EnsemblPlantsGene:Bra005793	Gene3D:3.20.20.70	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Aldolase_TIM	InterPro:FMN-dep_DH
InterPro:FMN_HAD	InterPro:IPR013785	InterPro:IPR037396	PANTHER:PTHR10578	PANTHER:PTHR10578:SF80	PFAM:PF01070
PFscan:PS51349	SUPFAM:SSF51395	UniParc:UPI000253FB95	UniProt:M4CNK5	MapMan:50.1.1	:

Description

AT3G14420 (E=3e-049) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative

Coordinates

chrA03:+:649020..649593

Molecular Weight (calculated)

13380.4 Da

IEP (calculated)

6.534

GRAVY (calculated)

-0.060

Length

117 amino acids

Sequence
(BLAST)

001: MEITNVTEYE AIAKEKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPEGEY ATARAAHELL
101: VLQNLVVKVF SKREDLL

Best Arabidopsis Sequence Match ( AT3G14420.1 )
(BLAST)

001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL

Arabidopsis Description

GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.