Factsheet for Bra021533.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39098	Canola	peroxisome	91.74	98.23
Bra021535.1-P	Field mustard	peroxisome	95.87	95.87
AT3G14130.1	Thale cress	peroxisome	88.15	88.15
Bra001536.1-P	Field mustard	peroxisome	87.33	87.81
AT3G14150.1	Thale cress	peroxisome	87.05	87.05
Bra036980.1-P	Field mustard	peroxisome	11.85	75.44
VIT_09s0002g00810.t01	Wine grape	peroxisome	75.48	75.27
Solyc03g122170.2.1	Tomato	peroxisome	69.42	73.47
PGSC0003DMT400058959	Potato	peroxisome	72.73	72.53
Solyc03g122130.2.1	Tomato	peroxisome	66.67	70.55
PGSC0003DMT400058960	Potato	peroxisome	69.97	69.78
GSMUA_Achr3P01940_001	Banana	peroxisome	69.15	68.96
PGSC0003DMT400058920	Potato	peroxisome	68.32	68.32
Solyc03g122140.2.1	Tomato	peroxisome	67.22	67.22
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	75.76	66.11
Os07t0616500-01	Rice	peroxisome	65.84	65.3
HORVU2Hr1G030930.2	Barley	peroxisome	65.29	64.75
OQU90257	Sorghum	peroxisome	65.01	64.31
TraesCS2D01G175900.1	Wheat	peroxisome	64.46	63.93
TraesCS2A01G168400.1	Wheat	peroxisome	64.19	63.66
OQU90259	Sorghum	peroxisome	63.64	62.77
TraesCS5A01G266500.2	Wheat	peroxisome	62.53	62.02
TraesCS5D01G274300.1	Wheat	peroxisome	61.98	61.48
TraesCS5B01G266100.1	Wheat	peroxisome	61.71	61.37
PGSC0003DMT400058950	Potato	peroxisome	63.36	61.01
Bra001550.1-P	Field mustard	peroxisome	60.61	59.95
Bra021556.1-P	Field mustard	peroxisome	60.33	59.67
Bra021555.1-P	Field mustard	peroxisome	57.02	59.65
Bra013299.1-P	Field mustard	peroxisome	59.78	59.29
Bra012602.1-P	Field mustard	peroxisome	60.06	59.24
Bra027338.1-P	Field mustard	peroxisome	60.06	58.92
Bra001551.1-P	Field mustard	peroxisome	57.58	58.38
Bra005793.1-P	Field mustard	peroxisome	18.73	58.12
Solyc03g122150.2.1	Tomato	peroxisome	22.31	52.94
HORVU6Hr1G051600.1	Barley	peroxisome, plastid	16.53	52.63
Zm00001d006868_P007	Maize	peroxisome	60.33	51.65
Bra027339.1-P	Field mustard	peroxisome	57.58	44.56
TraesCS2B01G194600.3	Wheat	peroxisome	45.45	42.2
Bra035032.1-P	Field mustard	mitochondrion	21.76	36.24
Bra027370.1-P	Field mustard	vacuole	79.61	28.87
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	6.34	19.33
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	13.77	19.23
Os03t0786000-01	Rice	plastid	11.85	15.93

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	EnsemblPlantsGene:Bra021533	EnsemblPlants:Bra021533.1
EnsemblPlants:Bra021533.1-P	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	InterPro:IPR013785	InterPro:IPR037396	UniProt:M4DYD7	PFAM:PF01070	PIRSF:PIRSF000138
ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF67	SUPFAM:SSF51395	UniParc:UPI0002544551
SEG:seg	:	:	:	:	:

Description

AT3G14130 (E=1e-170) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative

Coordinates

chrA01:+:24699722..24701635

Molecular Weight (calculated)

39865.7 Da

IEP (calculated)

7.958

GRAVY (calculated)

0.066

Length

363 amino acids

Sequence
(BLAST)

001: MDQIVNVNEF QELAKRALPK MYYDFYSGGA EDQHTLKENV EAFTRIMFRP RVLVDVSKID MSTRILGYPI SAPIMIAPTA MHMLAHPQGE TATAKAAATC
101: NTIMIVSYMA SCTIEEVASS CNAIRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP KLGRREADIK NKMVSPQLRN FEGLFSTEVI PSEGSGVEAF
201: ASSTFDASLN WKDIEWLRSI TKLPIMVKGI LTREDAVKAI EAGVDGIVVS NHGARQLDYS PATITVLEEI VLVVGGRVPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPVV YGLAAKGEDG VRKVIEMLKN ELELTMALSG CPTIDDITRN HVRTESDRLK SML

Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.