CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021533.1-P	Field mustard	peroxisome	98.23	91.74
CDY33247	Canola	peroxisome	96.46	90.08
CDY39100	Canola	peroxisome	94.4	89.14
AT3G14130.1	Thale cress	peroxisome	88.5	82.64
CDX82499	Canola	peroxisome	87.61	82.27
AT3G14150.1	Thale cress	peroxisome	87.32	81.54
CDX75747	Canola	peroxisome	84.37	78.79
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	86.14	78.71
CDY52265	Canola	peroxisome	79.06	74.24
CDY49371	Canola	peroxisome	12.39	72.41
VIT_09s0002g00810.t01	Wine grape	peroxisome	74.04	68.96
Solyc03g122170.2.1	Tomato	peroxisome	68.14	67.35
PGSC0003DMT400058959	Potato	peroxisome	72.27	67.31
CDY35448	Canola	peroxisome	22.12	66.37
CDY13160	Canola	peroxisome	22.12	66.37
CDX96897	Canola	peroxisome	33.63	65.52
Solyc03g122130.2.1	Tomato	peroxisome	65.49	64.72
PGSC0003DMT400058960	Potato	peroxisome	69.03	64.29
PGSC0003DMT400058920	Potato	peroxisome	67.55	63.09
Solyc03g122140.2.1	Tomato	peroxisome	66.67	62.26
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	74.04	60.34
CDY40892	Canola	peroxisome	30.38	59.54
CDX68646	Canola	peroxisome	60.77	57.7
CDY25425	Canola	peroxisome	60.77	57.7
CDX81437	Canola	peroxisome	60.77	57.7
CDY33220	Canola	peroxisome	60.18	57.14
CDY33221	Canola	peroxisome	60.77	56.13
CDY39114	Canola	peroxisome	60.77	56.13
PGSC0003DMT400058950	Potato	peroxisome	62.24	55.97
CDX82484	Canola	peroxisome	60.47	55.86
CDX75771	Canola	peroxisome	60.47	55.86
CDY39115	Canola	peroxisome	60.18	55.59
CDY55631	Canola	peroxisome	60.18	55.43
CDX78843	Canola	peroxisome	60.18	55.43
CDX82483	Canola	peroxisome	60.77	55.23
CDX97574	Canola	peroxisome	60.18	55.14
CDX98453	Canola	peroxisome	60.18	55.14
CDY01535	Canola	peroxisome	59.59	54.89
CDX99474	Canola	peroxisome	59.0	54.35
CDX98452	Canola	cytosol, nucleus, peroxisome	4.72	53.33
CDX97573	Canola	peroxisome	58.7	52.23
CDX98451	Canola	peroxisome	46.9	51.96
CDX81438	Canola	peroxisome	46.31	50.48
CDY40891	Canola	peroxisome	46.31	50.48
CDY16268	Canola	peroxisome	46.31	50.48
CDY11082	Canola	peroxisome	46.31	50.48
CDY25424	Canola	peroxisome	48.08	48.66
CDY35618	Canola	peroxisome	47.79	48.07
CDX68645	Canola	peroxisome	47.79	48.07
CDX75772	Canola	mitochondrion	38.05	44.79
CDY70372	Canola	cytosol, mitochondrion, plastid	14.75	42.73
CDX88442	Canola	cytosol, mitochondrion, plastid	14.75	42.73
Solyc03g122150.2.1	Tomato	peroxisome	18.58	41.18
CDX97546	Canola	peroxisome	80.24	37.88
CDY52449	Canola	mitochondrion	22.71	35.32
CDX86782	Canola	cytosol, peroxisome, plastid	22.71	34.53

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	GO:A0A078HQQ6	UniProt:A0A078HQQ6	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN
EnsemblPlants:CDY39098	ProteinID:CDY39098	ProteinID:CDY39098.1	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00067252001	InterPro:IPR013785	InterPro:IPR037396
PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF67
SUPFAM:SSF51395	UniParc:UPI0004EE723A	SEG:seg	:	:	:

Description

BnaA01g29580DBnaA01g29580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQQ6]

Coordinates

chrLK032440:-:122081..124016

Molecular Weight (calculated)

37015.5 Da

IEP (calculated)

9.123

GRAVY (calculated)

0.116

Length

339 amino acids

Sequence
(BLAST)

001: MDQIVNVNEF QELAKRALPK IIMFRPRVLV DVSKIDMSTR ILGYPISAPI MIAPTAMHML AHPQGETATA KAAATCNTIM IVSYMASCTI EEVASSCNAI
101: RFLQIYVYKR RDVTAQIVKR AEKAGFKAIV LTVDVPKLGR READIKNKMV SPQLRNFEGL FSTEVIPSEG SGVEAFASGT FDASLNWKDI EWLRSITKLP
201: IMVKGILTRE DALKAIEAGV DGIVVSNHGA RQLDYSPATI TVLEEIVHVV GGRVPVLLDG GVRRGTDVFK ALALGAQAVL IGRPVVYGLA AKGEDGVRKV
301: IDMLKNELEL TMALSGCPTI DDITRNHVRT ESDRLKSKL

Best Arabidopsis Sequence Match ( AT3G14130.4 )
(BLAST)

001: MYRFRPRVLV DVSNIDMSTS MLGYPISAPI MIAPTAMHKL AHPKGEIATA KAAAACNTIM IVSFMSTCTI EEVASSCNAV RFLQIYVYKR RDVTAQIVKR
101: AEKAGFKAIV LTVDVPRLGR READIKNKMI SPQLKNFEGL VSTEVRPNEG SGVEAFASSA FDASLSWKDI EWLRSITKLP ILVKGLLTRE DALKAVEAGV
201: DGIVVSNHGA RQLDYSPATI TVLEEVVHAV KGRIPVLLDG GVRRGTDVFK ALALGAQAVL IGRPIVYGLA AKGEDGVKKV IDMLKNEFEI TMALSGCPTI
301: DDVTRNHVRT ENERIKSML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.