CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33221	Canola	peroxisome	99.73	99.73
Bra021555.1-P	Field mustard	peroxisome	94.28	99.71
CDX75771	Canola	peroxisome	98.91	98.91
CDX82484	Canola	peroxisome	98.64	98.64
CDX68646	Canola	peroxisome	95.91	98.6
CDY25425	Canola	peroxisome	95.91	98.6
CDX81437	Canola	peroxisome	95.91	98.6
CDY39115	Canola	peroxisome	96.73	96.73
CDY33220	Canola	peroxisome	94.01	96.64
CDX98453	Canola	peroxisome	95.91	95.14
CDX97574	Canola	peroxisome	95.91	95.14
CDX82483	Canola	peroxisome	96.46	94.91
AT3G14415.2	Thale cress	peroxisome	96.19	94.64
CDX98452	Canola	cytosol, nucleus, peroxisome	7.63	93.33
CDY40892	Canola	peroxisome	43.87	93.06
Solyc07g056540.2.1	Tomato	plastid	91.83	90.84
CDY40891	Canola	peroxisome	76.84	90.68
CDX81438	Canola	peroxisome	76.84	90.68
CDY16268	Canola	peroxisome	76.84	90.68
CDY11082	Canola	peroxisome	76.84	90.68
PGSC0003DMT400071115	Potato	cytosol	90.46	89.49
KRH43857	Soybean	peroxisome	90.19	89.22
CDX98451	Canola	peroxisome	74.11	88.89
CDX97573	Canola	peroxisome	92.1	88.71
VIT_10s0003g03830.t01	Wine grape	peroxisome	89.37	88.17
KRH13608	Soybean	nucleus	89.1	88.14
CDY25424	Canola	peroxisome	79.02	86.57
CDY55631	Canola	peroxisome	85.29	85.05
CDX68645	Canola	peroxisome	77.93	84.87
CDY35618	Canola	peroxisome	77.93	84.87
CDY01535	Canola	peroxisome	84.74	84.51
CDX78843	Canola	peroxisome	80.93	80.71
CDX99474	Canola	peroxisome	80.38	80.16
GSMUA_Achr4P22900_001	Banana	peroxisome	32.7	77.92
CDX75772	Canola	mitochondrion	53.95	68.75
CDX88442	Canola	cytosol, mitochondrion, plastid	21.8	68.38
CDY70372	Canola	cytosol, mitochondrion, plastid	21.8	68.38
CDY33247	Canola	peroxisome	60.22	60.88
CDY39098	Canola	peroxisome	56.13	60.77
CDY39100	Canola	peroxisome	59.4	60.72
CDX75747	Canola	peroxisome	58.31	58.95
CDX82499	Canola	peroxisome	56.95	57.89
CDY52449	Canola	mitochondrion	34.33	57.8
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	58.04	57.41
CDX86782	Canola	cytosol, peroxisome, plastid	34.88	57.4
CDY52265	Canola	peroxisome	55.86	56.79
CDY13160	Canola	peroxisome	17.17	55.75
CDY35448	Canola	peroxisome	17.17	55.75
CDY49371	Canola	peroxisome	8.45	53.45
CDX96897	Canola	peroxisome	22.62	47.7
CDX97546	Canola	peroxisome	56.4	28.83

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	GO:A0A078HP01	UniProt:A0A078HP01	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN
EnsemblPlants:CDY39114	ProteinID:CDY39114	ProteinID:CDY39114.1	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00067279001	InterPro:IPR013785	InterPro:IPR037396
PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF80
SUPFAM:SSF51395	UniParc:UPI0004EEF754	SEG:seg	:	:	:

Description

BnaA01g29420DBnaA01g29420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HP01]

Coordinates

chrLK032440:+:244718..247199

Molecular Weight (calculated)

40399.0 Da

IEP (calculated)

9.171

GRAVY (calculated)

-0.047

Length

367 amino acids

Sequence
(BLAST)

001: MEITNVTEYE AIAKEKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPEGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRETDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITSMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLSEIT RNHIITEWET PRHLPKL

Best Arabidopsis Sequence Match ( AT3G14415.1 )
(BLAST)

001: MEITNVTEYD AIAKAKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVNKIDM ATTVLGFKIS MPIMVAPTAF QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDIQWLQ TITNMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFALAAEGE AGVKKVLQML RDEFELTMAL SGCRSLSEIT RNHIVTEWDT PRHLPRL

Arabidopsis Description

GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.