Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68646 Canola peroxisome 97.48 97.48
CDY25425 Canola peroxisome 97.48 97.48
CDX81437 Canola peroxisome 97.48 97.48
Bra021556.1-P Field mustard peroxisome 100.0 97.28
CDY39115 Canola peroxisome 100.0 97.28
CDX98453 Canola peroxisome 99.16 95.68
CDX97574 Canola peroxisome 99.16 95.68
AT3G14420.1 Thale cress peroxisome 97.48 94.82
CDX82484 Canola peroxisome 96.92 94.28
CDX75771 Canola peroxisome 96.92 94.28
CDY33221 Canola peroxisome 96.92 94.28
CDY39114 Canola peroxisome 96.64 94.01
CDX82483 Canola peroxisome 97.48 93.3
CDY40892 Canola peroxisome 43.7 90.17
CDX98451 Canola peroxisome 76.47 89.22
Solyc07g056540.2.1 Tomato plastid 92.44 88.95
PGSC0003DMT400071115 Potato cytosol 91.32 87.87
CDX81438 Canola peroxisome 76.47 87.78
CDY40891 Canola peroxisome 76.47 87.78
CDY16268 Canola peroxisome 76.47 87.78
CDY11082 Canola peroxisome 76.47 87.78
VIT_10s0003g03830.t01 Wine grape peroxisome 90.48 86.83
KRH43857 Soybean peroxisome 89.92 86.52
KRH13608 Soybean nucleus 89.36 85.98
CDX97573 Canola peroxisome 91.32 85.56
CDY25424 Canola peroxisome 78.43 83.58
CDY55631 Canola peroxisome 85.43 82.88
CDY01535 Canola peroxisome 84.87 82.34
CDX68645 Canola peroxisome 77.59 82.2
CDY35618 Canola peroxisome 77.59 82.2
CDX98452 Canola cytosol, nucleus, peroxisome 6.72 80.0
CDX78843 Canola peroxisome 79.83 77.45
CDX99474 Canola peroxisome 79.83 77.45
GSMUA_Achr4P22900_001 Banana peroxisome 33.33 77.27
CDX88442 Canola cytosol, mitochondrion, plastid 22.69 69.23
CDY70372 Canola cytosol, mitochondrion, plastid 22.69 69.23
CDX75772 Canola mitochondrion 55.74 69.1
CDY39098 Canola peroxisome 57.14 60.18
CDY33247 Canola peroxisome 59.94 58.95
CDY39100 Canola peroxisome 58.82 58.5
CDX75747 Canola peroxisome 58.54 57.58
CDY52449 Canola mitochondrion 34.73 56.88
CDX86782 Canola cytosol, peroxisome, plastid 35.01 56.05
CDX82499 Canola peroxisome 56.58 55.96
CDY52266 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 57.7 55.53
CDY49371 Canola peroxisome 8.96 55.17
CDY52265 Canola peroxisome 54.9 54.29
CDY13160 Canola peroxisome 16.25 51.33
CDY35448 Canola peroxisome 16.25 51.33
CDX96897 Canola peroxisome 22.69 46.55
CDX97546 Canola peroxisome 55.46 27.58
Protein Annotations
MapMan:1.3.2Gene3D:3.20.20.70GO:A0A078H3K2UniProt:A0A078H3K2InterPro:Aldolase_TIMInterPro:Alpha-hydoxy_acid_DH_FMN
EnsemblPlants:CDY33220ProteinID:CDY33220ProteinID:CDY33220.1InterPro:FMN-dep_DHInterPro:FMN_HADInterPro:FMN_hydac_DH_AS
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152
GO:GO:0010181GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00053968001InterPro:IPR013785InterPro:IPR037396
PFAM:PF01070PIRSF:PIRSF000138ScanProsite:PS00557PFscan:PS51349PANTHER:PTHR10578PANTHER:PTHR10578:SF80
SUPFAM:SSF51395UniParc:UPI0004EEA726SEG:seg:::
Description
BnaC01g36930DBnaC01g36930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3K2]
Coordinates
chrLK032309:-:49363..51642
Molecular Weight (calculated)
39272.7 Da
IEP (calculated)
9.858
GRAVY (calculated)
-0.059
Length
357 amino acids
Sequence
(BLAST)
001: MEITNVTEYE AIAKEKLPKM DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTILGFKIS MPIMVAPTAM QKMAHPEGEY ATARAASAAG TIMTLSSWAT
101: SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA SYVAGQIDRT
201: LSWKDVQWLQ TITSMPILVK GVITGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL GASGIFIGRP
301: VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIT RNHITTEWDT PRPSARL
Best Arabidopsis Sequence Match ( AT3G14420.2 )
(BLAST)
001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL
Arabidopsis Description
GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.