Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX68646 | Canola | peroxisome | 97.48 | 97.48 |
CDY25425 | Canola | peroxisome | 97.48 | 97.48 |
CDX81437 | Canola | peroxisome | 97.48 | 97.48 |
Bra021556.1-P | Field mustard | peroxisome | 100.0 | 97.28 |
CDY39115 | Canola | peroxisome | 100.0 | 97.28 |
CDX98453 | Canola | peroxisome | 99.16 | 95.68 |
CDX97574 | Canola | peroxisome | 99.16 | 95.68 |
AT3G14420.1 | Thale cress | peroxisome | 97.48 | 94.82 |
CDX82484 | Canola | peroxisome | 96.92 | 94.28 |
CDX75771 | Canola | peroxisome | 96.92 | 94.28 |
CDY33221 | Canola | peroxisome | 96.92 | 94.28 |
CDY39114 | Canola | peroxisome | 96.64 | 94.01 |
CDX82483 | Canola | peroxisome | 97.48 | 93.3 |
CDY40892 | Canola | peroxisome | 43.7 | 90.17 |
CDX98451 | Canola | peroxisome | 76.47 | 89.22 |
Solyc07g056540.2.1 | Tomato | plastid | 92.44 | 88.95 |
PGSC0003DMT400071115 | Potato | cytosol | 91.32 | 87.87 |
CDX81438 | Canola | peroxisome | 76.47 | 87.78 |
CDY40891 | Canola | peroxisome | 76.47 | 87.78 |
CDY16268 | Canola | peroxisome | 76.47 | 87.78 |
CDY11082 | Canola | peroxisome | 76.47 | 87.78 |
VIT_10s0003g03830.t01 | Wine grape | peroxisome | 90.48 | 86.83 |
KRH43857 | Soybean | peroxisome | 89.92 | 86.52 |
KRH13608 | Soybean | nucleus | 89.36 | 85.98 |
CDX97573 | Canola | peroxisome | 91.32 | 85.56 |
CDY25424 | Canola | peroxisome | 78.43 | 83.58 |
CDY55631 | Canola | peroxisome | 85.43 | 82.88 |
CDY01535 | Canola | peroxisome | 84.87 | 82.34 |
CDX68645 | Canola | peroxisome | 77.59 | 82.2 |
CDY35618 | Canola | peroxisome | 77.59 | 82.2 |
CDX98452 | Canola | cytosol, nucleus, peroxisome | 6.72 | 80.0 |
CDX78843 | Canola | peroxisome | 79.83 | 77.45 |
CDX99474 | Canola | peroxisome | 79.83 | 77.45 |
GSMUA_Achr4P22900_001 | Banana | peroxisome | 33.33 | 77.27 |
CDX88442 | Canola | cytosol, mitochondrion, plastid | 22.69 | 69.23 |
CDY70372 | Canola | cytosol, mitochondrion, plastid | 22.69 | 69.23 |
CDX75772 | Canola | mitochondrion | 55.74 | 69.1 |
CDY39098 | Canola | peroxisome | 57.14 | 60.18 |
CDY33247 | Canola | peroxisome | 59.94 | 58.95 |
CDY39100 | Canola | peroxisome | 58.82 | 58.5 |
CDX75747 | Canola | peroxisome | 58.54 | 57.58 |
CDY52449 | Canola | mitochondrion | 34.73 | 56.88 |
CDX86782 | Canola | cytosol, peroxisome, plastid | 35.01 | 56.05 |
CDX82499 | Canola | peroxisome | 56.58 | 55.96 |
CDY52266 | Canola | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 57.7 | 55.53 |
CDY49371 | Canola | peroxisome | 8.96 | 55.17 |
CDY52265 | Canola | peroxisome | 54.9 | 54.29 |
CDY13160 | Canola | peroxisome | 16.25 | 51.33 |
CDY35448 | Canola | peroxisome | 16.25 | 51.33 |
CDX96897 | Canola | peroxisome | 22.69 | 46.55 |
CDX97546 | Canola | peroxisome | 55.46 | 27.58 |
Protein Annotations
MapMan:1.3.2 | Gene3D:3.20.20.70 | GO:A0A078H3K2 | UniProt:A0A078H3K2 | InterPro:Aldolase_TIM | InterPro:Alpha-hydoxy_acid_DH_FMN |
EnsemblPlants:CDY33220 | ProteinID:CDY33220 | ProteinID:CDY33220.1 | InterPro:FMN-dep_DH | InterPro:FMN_HAD | InterPro:FMN_hydac_DH_AS |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0010181 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00053968001 | InterPro:IPR013785 | InterPro:IPR037396 |
PFAM:PF01070 | PIRSF:PIRSF000138 | ScanProsite:PS00557 | PFscan:PS51349 | PANTHER:PTHR10578 | PANTHER:PTHR10578:SF80 |
SUPFAM:SSF51395 | UniParc:UPI0004EEA726 | SEG:seg | : | : | : |
Description
BnaC01g36930DBnaC01g36930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3K2]
Coordinates
chrLK032309:-:49363..51642
Molecular Weight (calculated)
39272.7 Da
IEP (calculated)
9.858
GRAVY (calculated)
-0.059
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MEITNVTEYE AIAKEKLPKM DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTILGFKIS MPIMVAPTAM QKMAHPEGEY ATARAASAAG TIMTLSSWAT
101: SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA SYVAGQIDRT
201: LSWKDVQWLQ TITSMPILVK GVITGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL GASGIFIGRP
301: VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIT RNHITTEWDT PRPSARL
101: SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA SYVAGQIDRT
201: LSWKDVQWLQ TITSMPILVK GVITGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL GASGIFIGRP
301: VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIT RNHITTEWDT PRPSARL
001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL
Arabidopsis Description
GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.