CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013299.1-P	Field mustard	peroxisome	95.92	96.45
CDX78843	Canola	peroxisome	93.75	93.75
CDY01535	Canola	peroxisome	92.39	92.39
CDY55631	Canola	peroxisome	92.39	92.39
AT4G18360.4	Thale cress	peroxisome	91.3	91.3
CDY39115	Canola	peroxisome	80.16	80.38
CDY33221	Canola	peroxisome	80.16	80.38
CDY39114	Canola	peroxisome	80.16	80.38
CDX82484	Canola	peroxisome	79.62	79.84
CDX75771	Canola	peroxisome	79.62	79.84
CDY33220	Canola	peroxisome	77.45	79.83
CDX98453	Canola	peroxisome	80.16	79.73
CDX97574	Canola	peroxisome	80.16	79.73
PGSC0003DMT400054730	Potato	peroxisome	80.16	79.51
CDX81437	Canola	peroxisome	76.9	79.27
CDY25425	Canola	peroxisome	76.9	79.27
CDX68646	Canola	peroxisome	76.9	79.27
CDX82483	Canola	peroxisome	80.16	79.09
Solyc10g007600.2.1	Tomato	plastid	79.62	78.98
CDY11082	Canola	peroxisome	64.4	76.21
CDY16268	Canola	peroxisome	64.4	76.21
CDY40891	Canola	peroxisome	64.4	76.21
CDX81438	Canola	peroxisome	64.4	76.21
CDY40892	Canola	peroxisome	34.24	72.83
CDX97573	Canola	peroxisome	75.27	72.7
CDY25424	Canola	peroxisome	66.03	72.54
CDX98451	Canola	peroxisome	60.05	72.22
CDX68645	Canola	peroxisome	65.49	71.51
CDY35618	Canola	peroxisome	65.49	71.51
CDX98452	Canola	cytosol, nucleus, peroxisome	5.43	66.67
CDY33247	Canola	peroxisome	58.7	59.5
CDY39100	Canola	peroxisome	57.61	59.05
CDY39098	Canola	peroxisome	54.35	59.0
CDY49371	Canola	peroxisome	9.24	58.62
CDX75772	Canola	mitochondrion	44.84	57.29
CDX82499	Canola	peroxisome	55.98	57.06
CDX75747	Canola	peroxisome	56.25	57.02
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	56.52	56.06
CDX88442	Canola	cytosol, mitochondrion, plastid	17.66	55.56
CDY70372	Canola	cytosol, mitochondrion, plastid	17.66	55.56
CDY52265	Canola	peroxisome	54.35	55.4
CDY35448	Canola	peroxisome	16.3	53.1
CDY13160	Canola	peroxisome	16.3	53.1
CDY52449	Canola	mitochondrion	30.16	50.92
CDX86782	Canola	cytosol, peroxisome, plastid	30.71	50.67
CDX96897	Canola	peroxisome	22.28	47.13
CDX97546	Canola	peroxisome	54.89	28.13

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	GO:A0A078EF80	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	EnsemblPlants:CDX99474
ProteinID:CDX99474	ProteinID:CDX99474.1	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00107823001	InterPro:IPR013785	InterPro:IPR037396	PFAM:PF01070
PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF103	SUPFAM:SSF51395
UniParc:UPI0004EDB868	:	:	:	:	:

Description

BnaC01g10780D

Coordinates

chrLK031910:+:999354..1001563

Molecular Weight (calculated)

40836.3 Da

IEP (calculated)

6.182

GRAVY (calculated)

-0.080

Length

368 amino acids

Sequence
(BLAST)

001: MEITNVMEYE KIAKEKLPKL VYDYYASGAE DQWTLQENRN AFSRILFRPR ILKDVSEIDV STRVLGFNIS MPIMVAPTAM QKMAHPDGEL ATARATSAAG
101: TIMTLSTCAT CSVDEVASTG PGIRFFQLYV YEDRYVVRQL AKRAEEAGFK AIALTVDTPR FGRREADIKN RFALPRDLTL KNFEGLDLGE IDKTNDSWLA
201: SYAASQVDQS LSWKDIKWLQ SITSLPILLK GVLTAEDARI AVEYGAEGII VSNHGARQLD YVPPTIMALE EVVKAVQGRI PVFLDGGVRR GTDIFKALAL
301: GASGVFVGRP TLFSLAADGE AGVRKMLQML RDELELTMAL SGCSSLREIS RNHIKTDWDF PHYLPAKL

Best Arabidopsis Sequence Match ( AT4G18360.1 )
(BLAST)

001: MEITNVMEYE KIAKEKLPKM VYDYYASGAE DQWTLQENRN AFSRILFRPR ILIDVSKIDV STTVLGFNIS MPIMIAPTAM QKMAHPDGEL ATARATSAAG
101: TIMTLSSWAT CSVEEVASTG PGIRFFQLYV YKDRNVVIQL VKRAEEAGFK AIALTVDTPR LGRRESDIKN RFALPRGLTL KNFEGLDLGK IDKTNDSGLA
201: SYVAGQVDQS LSWKDIKWLQ SITSLPILVK GVITAEDARI AVEYGAAGII VSNHGARQLD YVPATIVALE EVVKAVEGRI PVFLDGGVRR GTDVFKALAL
301: GASGVFVGRP SLFSLAADGE AGVRKMLQML RDEFELTMAL SGCRSLREIS RTHIKTDWDT PHYLSAKL

Arabidopsis Description

GLO5Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [Source:UniProtKB/Swiss-Prot;Acc:O49506]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.