CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012602.1-P	Field mustard	peroxisome	99.73	99.73
CDY01535	Canola	peroxisome	99.18	99.18
AT4G18360.4	Thale cress	peroxisome	97.83	97.83
CDX78843	Canola	peroxisome	93.21	93.21
CDX99474	Canola	peroxisome	92.39	92.39
CDY39115	Canola	peroxisome	85.6	85.83
CDY33221	Canola	peroxisome	85.33	85.56
CDY33220	Canola	peroxisome	82.88	85.43
CDX97574	Canola	peroxisome	85.87	85.41
CDX98453	Canola	peroxisome	85.87	85.41
CDY39114	Canola	peroxisome	85.05	85.29
CDX75771	Canola	peroxisome	84.78	85.01
CDX82484	Canola	peroxisome	84.78	85.01
PGSC0003DMT400054730	Potato	peroxisome	85.33	84.64
CDX68646	Canola	peroxisome	82.07	84.59
CDY25425	Canola	peroxisome	82.07	84.59
CDX81437	Canola	peroxisome	82.07	84.59
CDX82483	Canola	peroxisome	85.33	84.18
Solyc10g007600.2.1	Tomato	plastid	83.97	83.29
CDY40891	Canola	peroxisome	68.75	81.35
CDX81438	Canola	peroxisome	68.75	81.35
CDY11082	Canola	peroxisome	68.75	81.35
CDY16268	Canola	peroxisome	68.75	81.35
CDY25424	Canola	peroxisome	70.65	77.61
CDX98451	Canola	peroxisome	64.4	77.45
CDX97573	Canola	peroxisome	79.35	76.64
CDY35618	Canola	peroxisome	69.84	76.26
CDX68645	Canola	peroxisome	69.84	76.26
CDY40892	Canola	peroxisome	35.6	75.72
CDX98452	Canola	cytosol, nucleus, peroxisome	5.71	70.0
CDY70372	Canola	cytosol, mitochondrion, plastid	20.65	64.96
CDX88442	Canola	cytosol, mitochondrion, plastid	20.65	64.96
CDX75772	Canola	mitochondrion	48.37	61.81
CDY39098	Canola	peroxisome	55.43	60.18
CDY33247	Canola	peroxisome	59.24	60.06
CDY39100	Canola	peroxisome	58.15	59.61
CDX75747	Canola	peroxisome	57.61	58.4
CDX82499	Canola	peroxisome	57.07	58.17
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	57.61	57.14
CDY49371	Canola	peroxisome	8.97	56.9
CDY52265	Canola	peroxisome	55.71	56.79
CDY52449	Canola	mitochondrion	32.88	55.5
CDX86782	Canola	cytosol, peroxisome, plastid	33.42	55.16
CDY13160	Canola	peroxisome	16.85	54.87
CDY35448	Canola	peroxisome	16.85	54.87
CDX96897	Canola	peroxisome	23.1	48.85
CDX97546	Canola	peroxisome	56.25	28.83

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	GO:A0A078IYV5	UniProt:A0A078IYV5	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN
EnsemblPlants:CDY55631	ProteinID:CDY55631	ProteinID:CDY55631.1	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00017143001	InterPro:IPR013785	InterPro:IPR037396
PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF103
SUPFAM:SSF51395	UniParc:UPI0004EE417A	:	:	:	:

Description

BnaA03g58240DBnaA03g58240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYV5]

Coordinates

chrLK033417:-:16670..19156

Molecular Weight (calculated)

40648.3 Da

IEP (calculated)

8.917

GRAVY (calculated)

-0.043

Length

368 amino acids

Sequence
(BLAST)

001: MEITNVMEYE KIAKEKLPKM VYDYYASGAE DQWTLQENRN AFSRILFRPR ILIDVSKIDV STTVLGFNIS MPIMVAPTAM QKMAHPDGEL ATARATSAAG
101: TIMTLSSWAT CSVEEVASTG PGIRFFQLYV YKDRNVVRQL VKRAEEAGFK AIALTVDTPR LGRRESDIKN RFALPRGLTL KNFEGLDLGK IDKTNDSGLA
201: SYVAGQVDQS LSWKDIKWLQ SITSLPILVK GVITAEDARI AVEYGAAGII VSNHGARQLD YVPATIMALE EVVKAVEGRL PVFLDGGVRR GTDVFKALAL
301: GASGVFVGRP SLFSLAADGE AGVRKMLQML RDEFELTMAL SGCRSLREIS RNHIKTDWDF PHYFPAKL

Best Arabidopsis Sequence Match ( AT4G18360.1 )
(BLAST)

001: MEITNVMEYE KIAKEKLPKM VYDYYASGAE DQWTLQENRN AFSRILFRPR ILIDVSKIDV STTVLGFNIS MPIMIAPTAM QKMAHPDGEL ATARATSAAG
101: TIMTLSSWAT CSVEEVASTG PGIRFFQLYV YKDRNVVIQL VKRAEEAGFK AIALTVDTPR LGRRESDIKN RFALPRGLTL KNFEGLDLGK IDKTNDSGLA
201: SYVAGQVDQS LSWKDIKWLQ SITSLPILVK GVITAEDARI AVEYGAAGII VSNHGARQLD YVPATIVALE EVVKAVEGRI PVFLDGGVRR GTDVFKALAL
301: GASGVFVGRP SLFSLAADGE AGVRKMLQML RDEFELTMAL SGCRSLREIS RTHIKTDWDT PHYLSAKL

Arabidopsis Description

GLO5Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [Source:UniProtKB/Swiss-Prot;Acc:O49506]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.