Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 6
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012602.1-P | Field mustard | peroxisome | 98.1 | 98.1 |
| CDY55631 | Canola | peroxisome | 97.83 | 97.83 |
| CDY01535 | Canola | peroxisome | 97.55 | 97.55 |
| Bra013299.1-P | Field mustard | peroxisome | 91.58 | 92.08 |
| CDX78843 | Canola | peroxisome | 91.85 | 91.85 |
| CDX99474 | Canola | peroxisome | 91.3 | 91.3 |
| AT3G14420.1 | Thale cress | peroxisome | 86.14 | 86.38 |
| PGSC0003DMT400054730 | Potato | peroxisome | 85.33 | 84.64 |
| KRH42555 | Soybean | endoplasmic reticulum | 85.05 | 84.59 |
| KRH42560 | Soybean | peroxisome | 83.42 | 83.88 |
| KRH42559 | Soybean | cytosol | 7.07 | 83.87 |
| Solyc10g007600.2.1 | Tomato | plastid | 84.51 | 83.83 |
| KRH58663 | Soybean | peroxisome | 83.42 | 83.42 |
| KRH42553 | Soybean | endoplasmic reticulum | 83.15 | 83.15 |
| AT3G14415.2 | Thale cress | peroxisome | 83.7 | 82.57 |
| KRH58657 | Soybean | peroxisome, plastid | 64.4 | 79.53 |
| KRH42558 | Soybean | peroxisome | 43.48 | 78.05 |
| KRH42554 | Soybean | peroxisome | 62.23 | 75.58 |
| AT3G14130.1 | Thale cress | peroxisome | 60.6 | 61.43 |
| AT3G14150.1 | Thale cress | peroxisome | 59.24 | 60.06 |
Protein Annotations
| MapMan:1.3.2 | Gene3D:3.20.20.70 | EntrezGene:827563 | ProteinID:AEE84031.1 | ProteinID:AEE84032.1 | ProteinID:ANM68137.1 |
| ArrayExpress:AT4G18360 | EnsemblPlantsGene:AT4G18360 | RefSeq:AT4G18360 | TAIR:AT4G18360 | RefSeq:AT4G18360-TAIR-G | EnsemblPlants:AT4G18360.4 |
| InterPro:Aldolase_TIM | InterPro:Alpha-hydoxy_acid_DH_FMN | Unigene:At.24604 | EMBL:BT001945 | ProteinID:CAA16716.1 | ProteinID:CAB78838.1 |
| InterPro:FMN-dep_DH | InterPro:FMN_HAD | InterPro:FMN_hydac_DH_AS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003973 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009853 | GO:GO:0009854 | GO:GO:0009987 |
| GO:GO:0010181 | GO:GO:0010204 | GO:GO:0016491 | GO:GO:0042742 | GO:GO:0050665 | GO:GO:0052852 |
| GO:GO:0052853 | GO:GO:0052854 | GO:GO:0055114 | InterPro:IPR013785 | InterPro:IPR037396 | RefSeq:NP_001078406.1 |
| RefSeq:NP_001329914.1 | RefSeq:NP_193570.1 | UniProt:O49506 | PFAM:PF01070 | PIRSF:PIRSF000138 | ScanProsite:PS00557 |
| PFscan:PS51349 | PANTHER:PTHR10578 | PANTHER:PTHR10578:SF103 | SUPFAM:SSF51395 | UniParc:UPI000000BD5B | : |
Description
GLO5Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [Source:UniProtKB/Swiss-Prot;Acc:O49506]
Coordinates
chr4:-:10145919..10148656
Molecular Weight (calculated)
40484.1 Da
IEP (calculated)
8.592
GRAVY (calculated)
-0.007
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MEITNVMEYE KIAKEKLPKM VYDYYASGAE DQWTLQENRN AFSRILFRPR ILIDVSKIDV STTVLGFNIS MPIMIAPTAM QKMAHPDGEL ATARATSAAG
101: TIMTLSSWAT CSVEEVASTG PGIRFFQLYV YKDRNVVIQL VKRAEEAGFK AIALTVDTPR LGRRESDIKN RFALPRGLTL KNFEGLDLGK IDKTNDSGLA
201: SYVAGQVDQS LSWKDIKWLQ SITSLPILVK GVITAEDARI AVEYGAAGII VSNHGARQLD YVPATIVALE EVVKAVEGRI PVFLDGGVRR GTDVFKALAL
301: GASGVFVGRP SLFSLAADGE AGVRKMLQML RDEFELTMAL SGCRSLREIS RTHIKTDWDT PHYLSAKL
101: TIMTLSSWAT CSVEEVASTG PGIRFFQLYV YKDRNVVIQL VKRAEEAGFK AIALTVDTPR LGRRESDIKN RFALPRGLTL KNFEGLDLGK IDKTNDSGLA
201: SYVAGQVDQS LSWKDIKWLQ SITSLPILVK GVITAEDARI AVEYGAAGII VSNHGARQLD YVPATIVALE EVVKAVEGRI PVFLDGGVRR GTDVFKALAL
301: GASGVFVGRP SLFSLAADGE AGVRKMLQML RDEFELTMAL SGCRSLREIS RTHIKTDWDT PHYLSAKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.