Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G14150.1 | Thale cress | peroxisome | 91.74 | 91.74 |
| CDY33247 | Canola | peroxisome | 90.08 | 90.08 |
| CDY39098 | Canola | peroxisome | 82.64 | 88.5 |
| Bra021533.1-P | Field mustard | peroxisome | 88.15 | 88.15 |
| Bra021535.1-P | Field mustard | peroxisome | 88.15 | 88.15 |
| CDY39100 | Canola | peroxisome | 87.05 | 88.02 |
| CDX82499 | Canola | peroxisome | 86.23 | 86.7 |
| Bra001536.1-P | Field mustard | peroxisome | 85.95 | 86.43 |
| CDX75747 | Canola | peroxisome | 83.47 | 83.47 |
| CDY52266 | Canola | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 85.12 | 83.29 |
| CDY13160 | Canola | peroxisome | 24.79 | 79.65 |
| CDY35448 | Canola | peroxisome | 24.79 | 79.65 |
| VIT_09s0002g00810.t01 | Wine grape | peroxisome | 75.48 | 75.27 |
| Solyc03g122170.2.1 | Tomato | peroxisome | 69.97 | 74.05 |
| PGSC0003DMT400058959 | Potato | peroxisome | 73.55 | 73.35 |
| Solyc03g122130.2.1 | Tomato | peroxisome | 66.67 | 70.55 |
| PGSC0003DMT400058960 | Potato | peroxisome | 69.7 | 69.51 |
| PGSC0003DMT400058920 | Potato | peroxisome | 68.87 | 68.87 |
| GSMUA_Achr3P01940_001 | Banana | peroxisome | 68.59 | 68.41 |
| Solyc03g122140.2.1 | Tomato | peroxisome | 68.04 | 68.04 |
| VIT_09s0002g00820.t01 | Wine grape | peroxisome, plastid | 76.03 | 66.35 |
| OQU90257 | Sorghum | peroxisome | 65.84 | 65.12 |
| Os07t0616500-01 | Rice | peroxisome | 64.74 | 64.21 |
| HORVU2Hr1G030930.2 | Barley | peroxisome | 64.46 | 63.93 |
| OQU90259 | Sorghum | peroxisome | 64.19 | 63.32 |
| TraesCS2A01G168400.1 | Wheat | peroxisome | 63.64 | 63.11 |
| TraesCS2D01G175900.1 | Wheat | peroxisome | 63.64 | 63.11 |
| TraesCS5A01G266500.2 | Wheat | peroxisome | 63.09 | 62.57 |
| TraesCS5D01G274300.1 | Wheat | peroxisome | 62.26 | 61.75 |
| TraesCS5B01G266100.1 | Wheat | peroxisome | 61.98 | 61.64 |
| AT3G14420.1 | Thale cress | peroxisome | 61.43 | 60.76 |
| PGSC0003DMT400058950 | Potato | peroxisome | 63.09 | 60.74 |
| AT4G18360.4 | Thale cress | peroxisome | 61.43 | 60.6 |
| AT3G14415.2 | Thale cress | peroxisome | 60.88 | 59.25 |
| Solyc03g122150.2.1 | Tomato | peroxisome | 22.04 | 52.29 |
| Zm00001d006868_P007 | Maize | peroxisome | 60.61 | 51.89 |
| HORVU6Hr1G051600.1 | Barley | peroxisome, plastid | 16.25 | 51.75 |
| TraesCS2B01G194600.3 | Wheat | peroxisome | 45.73 | 42.46 |
| Zm00001d024312_P001 | Maize | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 6.61 | 20.17 |
| Zm00001d023759_P001 | Maize | mitochondrion, nucleus, peroxisome | 13.5 | 18.85 |
| Os03t0786000-01 | Rice | plastid | 11.29 | 15.19 |
Protein Annotations
| Gene3D:3.20.20.70 | MapMan:50.1.1 | EntrezGene:820630 | ProteinID:AEE75475.1 | ProteinID:ANM65219.1 | ArrayExpress:AT3G14130 |
| EnsemblPlantsGene:AT3G14130 | RefSeq:AT3G14130 | TAIR:AT3G14130 | RefSeq:AT3G14130-TAIR-G | EnsemblPlants:AT3G14130.1 | TAIR:AT3G14130.1 |
| EMBL:AY085037 | InterPro:Aldolase_TIM | InterPro:Alpha-hydoxy_acid_DH_FMN | Unigene:At.42696 | ProteinID:BAB02977.1 | EMBL:BT002739 |
| InterPro:FMN-dep_DH | InterPro:FMN_HAD | InterPro:FMN_hydac_DH_AS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003973 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009853 | GO:GO:0009854 | GO:GO:0009987 | GO:GO:0010181 | GO:GO:0016491 |
| GO:GO:0042742 | GO:GO:0050665 | GO:GO:0052852 | GO:GO:0052853 | GO:GO:0052854 | GO:GO:0055114 |
| InterPro:IPR013785 | InterPro:IPR037396 | RefSeq:NP_001327205.1 | RefSeq:NP_188029.1 | PFAM:PF01070 | PIRSF:PIRSF000138 |
| PO:PO:0000293 | ScanProsite:PS00557 | PFscan:PS51349 | PANTHER:PTHR10578 | PANTHER:PTHR10578:SF67 | UniProt:Q9LJH5 |
| SUPFAM:SSF51395 | UniParc:UPI000000BD96 | SEG:seg | : | : | : |
Description
GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
Coordinates
chr3:-:4685646..4688309
Molecular Weight (calculated)
39880.6 Da
IEP (calculated)
8.305
GRAVY (calculated)
0.011
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.