Factsheet for Os03t0786000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0198700-01	Rice	vacuole	6.3	24.29
Bra036980.1-P	Field mustard	peroxisome	4.44	21.05
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	13.7	14.23
KRH25749	Soybean	vacuole	4.07	13.1
VIT_09s0002g00810.t01	Wine grape	peroxisome	17.04	12.64
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	5.56	12.61
Os04t0623600-01	Rice	extracellular	4.44	12.24
Os07t0616500-01	Rice	peroxisome	16.3	12.02
Bra021533.1-P	Field mustard	peroxisome	15.93	11.85
Solyc03g122140.2.1	Tomato	peroxisome	15.93	11.85
Bra021535.1-P	Field mustard	peroxisome	15.93	11.85
PGSC0003DMT400058920	Potato	peroxisome	15.56	11.57
PGSC0003DMT400058959	Potato	peroxisome	15.56	11.54
HORVU6Hr1G051600.1	Barley	peroxisome, plastid	4.81	11.4
Os03t0786100-01	Rice	peroxisome	15.56	11.38
Solyc03g122170.2.1	Tomato	peroxisome	14.44	11.37
AT3G14150.1	Thale cress	peroxisome	15.19	11.29
AT3G14130.1	Thale cress	peroxisome	15.19	11.29
PGSC0003DMT400058960	Potato	peroxisome	15.19	11.26
Os04t0623500-02	Rice	peroxisome	15.19	11.17
Os07t0152900-01	Rice	peroxisome	15.19	11.11
Solyc03g122150.2.1	Tomato	peroxisome	6.3	11.11
Bra001536.1-P	Field mustard	peroxisome	14.81	11.08
Solyc03g122130.2.1	Tomato	peroxisome	14.07	11.08
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	17.04	11.06
PGSC0003DMT400058950	Potato	peroxisome	14.07	10.08
Bra027370.1-P	Field mustard	vacuole	14.81	4.0
CDX98452	Canola	cytosol, nucleus, peroxisome	0.0	0.0

Protein Annotations

MapMan:23.4.1.2.1	ProteinID:ABF99229.1	EMBL:AK061286	EMBL:AK073187	ProteinID:BAF13400.1	ProteinID:BAS86729.1
ProteinID:EAZ28826.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016560	EnsemblPlantsGene:Os03g0786000	EnsemblPlants:Os03t0786000-01	PANTHER:PTHR19332	PANTHER:PTHR19332:SF2	InterPro:Pex13
UniProt:Q10CE6	UniParc:UPI0000DB43A0	SEG:seg	:	:	:

Description

Similar to Glycine-rich protein. (Os03t0786000-01)

Coordinates

chr3:+:32624612..32627796

Molecular Weight (calculated)

28032.8 Da

IEP (calculated)

9.104

GRAVY (calculated)

-0.385

Length

270 amino acids

Sequence
(BLAST)

001: MAGSNPPPKP WERAGTSSGP APFKPPSGGS TSDIVEASGT AKPGEVVSAA ESNVASNVNS TISRPVPPRP WQQQGYGNSY GGYGSSMYSS LGGFGGPYSS
101: GGLYGNNMYS SYGGGYGGMY GSSGMYGGSM YNSGMGGPYG GYGMGMGAYN QGPNSFGPPA PPPGFWMSFL RVMHGVVNFC GRVAFLFSQN TQAFHMFISA
201: LLQLCDRTGM LYGELARFVL RLLGIKTKAK KGGVQGAETS SFEGPGHHFA EAPKANNSWD SVWTDDGSGK

Best Arabidopsis Sequence Match ( AT3G07560.1 )
(BLAST)

001: MASQPAGGSP PKPWEKEGNT SGPNPFRPPS NTSTAGSVEA SGTANPGEVV PPPVNRPNTA ANMNSLSRPV PARPWEQQNY GSTMGGGYGS NLGMTSGYGS
101: GTYGSALGGY GSSYGGGMYG GSSMYRGGYG GGGLYGSSGM YGGGAMGGYG GTMGGYGMGM GTGMGMGMGM GMGGPYGSQD PNDPFNQPPS PPGFWISFLR
201: VMQGAVNFFG RVAMLIDQNT QAFHMFMSAL LQLFDRGGML YGELARFVLR MLGVRTRPRK MQQPPQGPNG LPLPHQPHGN QNYLEGPKTA APGGGGGWDN
301: VWGN

Arabidopsis Description

PEX13Peroxisomal membrane protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.