Factsheet for Os08t0198700-01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	peroxisome
PProwler:	secretory
TargetP:	secretory
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Os08t0500100-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G14420.1	Os08t0500100-02	AT5G56290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0623600-01	Rice	extracellular	40.0	28.57
Os03t0786100-01	Rice	peroxisome	80.0	15.18
Os07t0152900-01	Rice	peroxisome	78.57	14.91
AT3G14420.1	Thale cress	peroxisome	75.71	14.44
VIT_19s0093g00510.t01	Wine grape	peroxisome	75.71	14.29
Solyc07g056540.2.1	Tomato	plastid	75.71	14.29
GSMUA_Achr7P07880_001	Banana	peroxisome, plasma membrane, unclear	74.29	14.17
EER93339	Sorghum	peroxisome	74.29	14.13
HORVU0Hr1G013900.4	Barley	peroxisome	65.71	14.07
PGSC0003DMT400071115	Potato	cytosol	74.29	14.02
VIT_10s0003g03830.t01	Wine grape	peroxisome	74.29	13.98
Os04t0623500-02	Rice	peroxisome	72.86	13.9
KRH13608	Soybean	nucleus	72.86	13.75
KRH43857	Soybean	peroxisome	72.86	13.75
AT3G14415.2	Thale cress	peroxisome	72.86	13.67
TraesCS5A01G424400.1	Wheat	peroxisome	67.14	12.7
TraesCS5B01G426500.1	Wheat	golgi	67.14	12.7
TraesCS5D01G432900.1	Wheat	peroxisome	67.14	12.7
CDY52449	Canola	mitochondrion	32.86	10.55
Bra035032.1-P	Field mustard	mitochondrion	32.86	10.55
CDX86782	Canola	cytosol, peroxisome, plastid	32.86	10.31
Os07t0616500-01	Rice	peroxisome	50.0	9.56
Os03t0786000-01	Rice	plastid	24.29	6.3
CDX88442	Canola	cytosol, mitochondrion, plastid	7.14	4.27
CDY70372	Canola	cytosol, mitochondrion, plastid	7.14	4.27
GSMUA_Achr4P22900_001	Banana	peroxisome	5.71	2.6

Protein Annotations

Gene3D:3.20.20.70	MapMan:35.1	InterPro:Aldolase_TIM	ProteinID:BAH94154.1	ProteinID:BAT04238.1	UniProt:C7J5K1
InterPro:FMN-dep_DH	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	EnsemblPlantsGene:Os08g0198700
EnsemblPlants:Os08t0198700-01	PFAM:PF01070	PANTHER:PTHR10578	PANTHER:PTHR10578:SF80	SUPFAM:SSF51395	TMHMM:TMhelix
UniParc:UPI0001B66665	:	:	:	:	:

Description

GLYCOLATE OXIDASE 6Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment). (Os08t0198700-01);Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment). (Os08t0198700-02)

Coordinates

chr8:+:5691120..5697423

Molecular Weight (calculated)

7451.4 Da

IEP (calculated)

5.628

GRAVY (calculated)

0.750

Length

70 amino acids

Sequence
(BLAST)

1: VPQLFCPRIL IDVSKIDMSA IVLGFEISMP VMIAPSAMQK MAHPDGEYAT AMAASAGGTI MTVILGYFKC

Best Arabidopsis Sequence Match ( AT4G18360.3 )
(BLAST)

001: MEITNVMEYE KIAKEKLPKM VYDYYASGAE DQWTLQENRN AFSRILFRPR ILIDVSKIDV STTVLGFNIS MPIMIAPTAM QKMAHPDGEL ATARATSAAG
101: TIMTLSSWAT CSVEEVASTG PGIRFFQLYV YKDRNVVIQL VKRAEEAGFK AIALTVDTPR LGRRESDIKN RFALPRGLTL KNFEGLDLGK IDKTNDSGLA
201: SYVAGQVDQS LSWKDIKWLQ SITSLPILVK GVITAEDGKT NILRMRICIN LLLEVFIMF

Arabidopsis Description

GLO5Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [Source:UniProtKB/Swiss-Prot;Acc:O49506]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.