Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0925200-01 | |
| Os08t0530400-01 | |
| Os11t0147000-01 | |
| Os12t0143900-01 | |
| Os12t0442800-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15431 | Sorghum | plastid | 86.55 | 86.78 |
| HORVU7Hr1G049220.10 | Barley | plastid | 87.77 | 86.36 |
| TraesCS7A01G241500.5 | Wheat | cytosol, plastid | 87.36 | 85.96 |
| Zm00001d031327_P009 | Maize | plastid | 86.14 | 85.68 |
| TraesCS7B01G137000.2 | Wheat | cytosol, plastid | 86.96 | 85.56 |
| TraesCS7D01G240500.3 | Wheat | cytosol, plastid | 85.87 | 84.38 |
| CDY67858 | Canola | cytosol | 24.32 | 81.0 |
| TraesCS6A01G105000.1 | Wheat | plastid | 75.95 | 78.84 |
| Zm00001d052851_P002 | Maize | plastid | 81.39 | 77.89 |
| CDY66435 | Canola | cytosol | 11.55 | 73.28 |
| GSMUA_Achr7P20310_001 | Banana | plastid | 69.43 | 67.41 |
| VIT_19s0015g01940.t01 | Wine grape | plastid | 64.95 | 64.95 |
| Solyc10g005650.2.1 | Tomato | plastid | 63.18 | 62.5 |
| PGSC0003DMT400029209 | Potato | cytosol, plastid | 63.04 | 62.37 |
| CDY49390 | Canola | plastid | 58.29 | 61.55 |
| KRH56371 | Soybean | plastid | 61.41 | 61.41 |
| AT5G56290.1 | Thale cress | plastid | 60.33 | 60.99 |
| KRH62568 | Soybean | plastid | 61.01 | 60.84 |
| CDY11941 | Canola | plastid | 60.19 | 60.68 |
| Bra028938.1-P | Field mustard | plastid | 60.19 | 60.68 |
| CDY36789 | Canola | plastid | 60.19 | 58.68 |
| Bra002826.1-P | Field mustard | plastid | 58.56 | 56.56 |
| CDY66434 | Canola | cytosol, nucleus, plastid | 18.48 | 48.06 |
| CDY69423 | Canola | plastid | 27.72 | 47.0 |
| CDY20736 | Canola | extracellular | 3.67 | 42.19 |
| Bra035613.1-P | Field mustard | extracellular, mitochondrion | 5.3 | 33.05 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:23.4.1.1.1 | EntrezGene:4345945 | EMBL:AK065120 | ProteinID:BAD08812.1 | ProteinID:BAF24067.1 |
| ProteinID:BAT06104.1 | GO:GO:0003674 | GO:GO:0005052 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005778 | GO:GO:0005829 |
| GO:GO:0006625 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016560 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| EnsemblPlantsGene:Os08g0500100 | EnsemblPlants:Os08t0500100-02 | PFAM:PF13181 | PFAM:PF13414 | PFAM:PF13432 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR10130 | PANTHER:PTHR10130:SF0 | InterPro:PTS1R_family | UniProt:Q6ZKM0 | SMART:SM00028 |
| SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI000023AC13 | RefSeq:XP_015650440.1 |
| SEG:seg | : | : | : | : | : |
Description
PEROXIN 5Similar to Peroxisomal targeting signal 1 receptor short form. (Os08t0500100-01);Similar to Peroxisomal targeting sequence 1 receptor (Fragment). (Os08t0500100-02)
Coordinates
chr8:+:24685288..24694485
Molecular Weight (calculated)
81462.7 Da
IEP (calculated)
4.451
GRAVY (calculated)
-0.553
Length
736 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMRHLITGQ GNCAPDGASS SNPFGNLANA IFGQSSKAQS IKELPGSAVN VPTTSELGTA APLSTIPGSE NEFKQDQLPL ARGADFIRGG PSHDWVESFR
101: PPGLPEFAVP DAQLKEFEQI FNSTGPTFGP PVMDGPPQRV LSGVLRSFLA SGQAGVPFQP VPVPALGLSE SDKQCIRDRS CIMARHILAD QPEEYIQAQV
201: NTLLHSLDID SNYRMKGPMH GPYPEMEEYW NQSQSAMRSG PMHNAADKWI TEFGKQNNNP EEWAHSFEQQ YGSNGWASEF EQHQSQMAMT GGMNMANLAA
301: MEQSRMLAQT LASNNDPKFQ NSKFFQFVSK MSRGELIIED NQVKQGSASQ SSGWADEFQT QYNANANSWA DQFVHEEMSQ GADKWASEFS TEYNQGGLNE
401: NWIDEFSKMR VDDEWAEEFS GGTFGESSAD PWVDEFQNQL SASKQNSGAS RGVYVFSDMN PYVGHPNPMQ EGQELFRKGL LSEAVLALEA EVLKNPDNAE
501: GWRLLGVTHA ENDDDQQAIA AMMRAQEADP TNLEVLLALG VSHTNELEQG EALRYLHRWL QNHPKYGGIA PPQPTDSPYG PDVIRLFNEA AQMSPEDADV
601: HIVLGVLYNL SREYDKAIAA FKTALQLKPQ DYSLWNKLGA TQANSIQSAD AILAYQQALD LKPNYVRAWA NMGISYANQG LYEDSIRYYV RAVAMNPKAD
701: NAWQYLRISL SNASRADMIA ACDSRNLDVL QKEFPL
101: PPGLPEFAVP DAQLKEFEQI FNSTGPTFGP PVMDGPPQRV LSGVLRSFLA SGQAGVPFQP VPVPALGLSE SDKQCIRDRS CIMARHILAD QPEEYIQAQV
201: NTLLHSLDID SNYRMKGPMH GPYPEMEEYW NQSQSAMRSG PMHNAADKWI TEFGKQNNNP EEWAHSFEQQ YGSNGWASEF EQHQSQMAMT GGMNMANLAA
301: MEQSRMLAQT LASNNDPKFQ NSKFFQFVSK MSRGELIIED NQVKQGSASQ SSGWADEFQT QYNANANSWA DQFVHEEMSQ GADKWASEFS TEYNQGGLNE
401: NWIDEFSKMR VDDEWAEEFS GGTFGESSAD PWVDEFQNQL SASKQNSGAS RGVYVFSDMN PYVGHPNPMQ EGQELFRKGL LSEAVLALEA EVLKNPDNAE
501: GWRLLGVTHA ENDDDQQAIA AMMRAQEADP TNLEVLLALG VSHTNELEQG EALRYLHRWL QNHPKYGGIA PPQPTDSPYG PDVIRLFNEA AQMSPEDADV
601: HIVLGVLYNL SREYDKAIAA FKTALQLKPQ DYSLWNKLGA TQANSIQSAD AILAYQQALD LKPNYVRAWA NMGISYANQG LYEDSIRYYV RAVAMNPKAD
701: NAWQYLRISL SNASRADMIA ACDSRNLDVL QKEFPL
001: MAMRDLVNGG AACAVPGSSS SSNPLGALTN ALLGSSSKTQ ERLKEIPNAN RSGPRPQFYS EDQQIRSLPG SELDQPLLQP GAQGSEFFRG FRSVDQNGLG
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL
Arabidopsis Description
PEX5Peroxisome biogenesis protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.