Factsheet for Zm00001d031327_P009

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d011971_P001
Zm00001d023238_P002
Zm00001d031617_P001
Zm00001d040496_P001
Zm00001d052485_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56290.1	Zm00001d031617_P001	AT3G01910.1	21798944
AT5G56290.1	Zm00001d040496_P001	AT3G01910.1	21798944
AT5G56290.1	Zm00001d023238_P002	AT5G27600.1	16256065
AT5G56290.1	Zm00001d052485_P001	AT5G27600.1	16256065
AT5G56290.1	Zm00001d011971_P001	AT5G43280.1	24879895

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15431	Sorghum	plastid	94.73	95.5
Zm00001d052851_P002	Maize	plastid	89.86	86.48
Os08t0500100-02	Rice	cytosol	85.68	86.14
HORVU7Hr1G049220.10	Barley	plastid	84.73	83.82
TraesCS7A01G241500.5	Wheat	cytosol, plastid	84.59	83.69
TraesCS7B01G137000.2	Wheat	cytosol, plastid	84.19	83.29
TraesCS7D01G240500.3	Wheat	cytosol, plastid	83.11	82.11
CDY67858	Canola	cytosol	23.65	79.19
TraesCS6A01G105000.1	Wheat	plastid	73.65	76.87
CDY66435	Canola	cytosol	11.49	73.28
GSMUA_Achr7P20310_001	Banana	plastid	66.89	65.3
VIT_19s0015g01940.t01	Wine grape	plastid	63.92	64.27
Solyc10g005650.2.1	Tomato	plastid	62.97	62.63
PGSC0003DMT400029209	Potato	cytosol, plastid	62.84	62.5
KRH56371	Soybean	plastid	60.81	61.14
CDY49390	Canola	plastid	57.57	61.12
CDY11941	Canola	plastid	60.27	61.1
Bra028938.1-P	Field mustard	plastid	60.27	61.1
AT5G56290.1	Thale cress	plastid	59.86	60.85
KRH62568	Soybean	plastid	60.27	60.43
CDY36789	Canola	plastid	60.27	59.07
Bra002826.1-P	Field mustard	plastid	58.24	56.56
CDY69423	Canola	plastid	28.51	48.62
CDY66434	Canola	cytosol, nucleus, plastid	17.97	47.0
CDY20736	Canola	extracellular	3.65	42.19
Bra035613.1-P	Field mustard	extracellular, mitochondrion	5.14	32.2

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100191477	MapMan:23.4.1.1.1	UniProt:A0A1D6KI98	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	ProteinID:ONM02713.1	PFAM:PF13181
PFAM:PF13414	PFAM:PF13432	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR10130	PANTHER:PTHR10130:SF0
InterPro:PTS1R_family	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI0008431979	EnsemblPlantsGene:Zm00001d031327	EnsemblPlants:Zm00001d031327_P009	EnsemblPlants:Zm00001d031327_T009	SEG:seg	:

Description

Peroxisome biogenesis protein 5

Coordinates

chr1:+:186062767..186075408

Molecular Weight (calculated)

82085.3 Da

IEP (calculated)

4.506

GRAVY (calculated)

-0.546

Length

740 amino acids

Sequence
(BLAST)

001: MALRHLVTGQ NNCVPDGASS SNPLNALANA FLGQSSKAQS IKELPGSVNV PSTSDFSVSA PLSNIPGSEN EFKQDQRPLA RGADFIRGGP ANDWIESFRP
101: PRVPQLGVEA QFPDFEQIYN NAGTTFQFQP PLDGPPQRVL SGVLHSFLTS GPAGVPFQPL PVPAALGLSE SDKQCIRDRS CIMARHIFSD QPEEYIQSQV
201: NTLLHSLDID NRMRGPMHGQ YPELQEYWKQ SQSSTRPAPM HNAADKWITE FGKQNNNPEN WANSFEQQYG PNGWASEFEQ HQSQMAMRQM GGANMANLAA
301: MEQSRVLAQT LASNNDPKFQ NSKFFQFVSK MSRGELIIED NQVKEGSASQ SSGWADEFQT PYIANANSWA DQFAHEELSQ GADKWVSEFS SQPNHGALNE
401: NWVDEFSKLN VTDEWAEEFS GGGFGESSAD PWVDEFQEHL SSFKQSPGAS RGVYVFSENN PYVGHPNPMQ EGQELFRKGL LSEAVLALEA EVLKNPDNTE
501: GWRLLGVTHA ENDDDQQAIA AMMRALEANP TNLEVLLALG VSHTNAMDAE LEQGEALRYL YRWLQNQPKY GGLVPLQSTD SPYGPDVVRL FNEAAQMSPE
601: DADVHIVLGV LYNLSREYDK AIASFKTALQ LKPQDYSLWN KLGATQANSI QSADAILAYQ QALDLKPNYV RAWANMGISY ANQGLYEDSI RYYVRAVAMN
701: PKADNAWQYL RISLSNASRA DMIAACDARN LDALQKEFPL

Best Arabidopsis Sequence Match ( AT5G56290.1 )
(BLAST)

001: MAMRDLVNGG AACAVPGSSS SSNPLGALTN ALLGSSSKTQ ERLKEIPNAN RSGPRPQFYS EDQQIRSLPG SELDQPLLQP GAQGSEFFRG FRSVDQNGLG
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL

Arabidopsis Description

PEX5Peroxisome biogenesis protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.