Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g005650.2.1 | Tomato | plastid | 98.25 | 98.25 |
| VIT_19s0015g01940.t01 | Wine grape | plastid | 74.73 | 75.54 |
| KRH62568 | Soybean | plastid | 71.24 | 71.82 |
| KRH56371 | Soybean | plastid | 70.83 | 71.6 |
| AT5G56290.1 | Thale cress | plastid | 68.01 | 69.51 |
| Bra028938.1-P | Field mustard | plastid | 67.74 | 69.04 |
| GSMUA_Achr7P20310_001 | Banana | plastid | 69.76 | 68.47 |
| EES15431 | Sorghum | plastid | 62.9 | 63.76 |
| Bra002826.1-P | Field mustard | plastid | 65.19 | 63.65 |
| Os08t0500100-02 | Rice | cytosol | 62.37 | 63.04 |
| Zm00001d031327_P009 | Maize | plastid | 62.5 | 62.84 |
| HORVU7Hr1G049220.10 | Barley | plastid | 62.5 | 62.17 |
| TraesCS7A01G241500.5 | Wheat | cytosol, plastid | 61.83 | 61.5 |
| TraesCS7B01G137000.2 | Wheat | cytosol, plastid | 61.56 | 61.23 |
| TraesCS7D01G240500.3 | Wheat | cytosol, plastid | 61.56 | 61.15 |
| CDY69423 | Canola | plastid | 35.22 | 60.37 |
| Zm00001d052851_P002 | Maize | plastid | 61.02 | 59.04 |
| TraesCS6A01G105000.1 | Wheat | plastid | 52.55 | 55.15 |
| Bra035613.1-P | Field mustard | extracellular, mitochondrion | 5.38 | 33.9 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:102585393 | MapMan:23.4.1.1.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006625 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009987 | GO:GO:0016043 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR019734 | UniProt:M1ASF1 | PFAM:PF00515 | PFAM:PF13432 | EnsemblPlantsGene:PGSC0003DMG400011237 | PGSC:PGSC0003DMG400011237 |
| EnsemblPlants:PGSC0003DMT400029209 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR10130 | PANTHER:PTHR10130:SF0 | InterPro:PTS1R_family |
| SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| UniParc:UPI00029626D0 | RefSeq:XP_006352575.1 | SEG:seg | : | : | : |
Description
Peroxisomal targeting signal 1 receptor [Source:PGSC_GENE;Acc:PGSC0003DMG400011237]
Coordinates
chr10:-:704475..717826
Molecular Weight (calculated)
82805.2 Da
IEP (calculated)
4.672
GRAVY (calculated)
-0.534
Length
744 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMRDLVTGA PSCGEPSSSS NPLGALANAL IGSSSKTQER LKEIPTSVTT SSNGNFLAGV EEPFVSLPGS EFEHPLQPNI QGSQFLQGFR SADQNRLADA
101: WDEIQRPQLP FAHGSQNMTN IPLEHARLQP DLNGPPQQVL SSFLHSFVNS GHGGVPFRPA SLPLLGLSEG DKQCIRDRST IMARHFFADK TEDFINRQVN
201: ALLSSLEIDN HVRARGPVPG RYPELEEYWN ESLAMKPVPH VADGWISEFA QNRVGHADPN AWAQSFEQQH GANGWASEFE HEQSQLGMIG QMRGANIPNL
301: AAMEQTRMLA HTLAQNSDPK FQNSKFLQFV SKMSRGEISI EENQFKPATI SSGDWAAEYE QQHNGGQSWA DQFAHEELSR GPQGWVNEFS AERAQHGSVN
401: DEWVSEFSKL NVNDDWADEF GRQVAEGAFG ETSADGWAEA YDEYMNEQAA LKQQSDASRG VYVFSDLNPY VGHPNPLKEG QELFRKGLLS EAVLALEAEV
501: LKNPENAEGW RLLGIAHAEN DDDQQAIAAM MRAQEADPAN LEVLLSLGVS HTNELEQQAA LKYLYSWLRH HPKYGSIAPQ EQPISFYHAD VARLFTDAAK
601: MAPEDADVHI VLGVLYNLSR EYDKAIESFK TALELKPRDY SLWNKLGATQ ANSVQSSDAI LAYQQALDIK PNYVRAWANM GISYANQGMY EDSIRYYVRA
701: LAMNPKADNA WQYLRISLSC ASRNDMLEAC DSRNIDVLQK EFPL
101: WDEIQRPQLP FAHGSQNMTN IPLEHARLQP DLNGPPQQVL SSFLHSFVNS GHGGVPFRPA SLPLLGLSEG DKQCIRDRST IMARHFFADK TEDFINRQVN
201: ALLSSLEIDN HVRARGPVPG RYPELEEYWN ESLAMKPVPH VADGWISEFA QNRVGHADPN AWAQSFEQQH GANGWASEFE HEQSQLGMIG QMRGANIPNL
301: AAMEQTRMLA HTLAQNSDPK FQNSKFLQFV SKMSRGEISI EENQFKPATI SSGDWAAEYE QQHNGGQSWA DQFAHEELSR GPQGWVNEFS AERAQHGSVN
401: DEWVSEFSKL NVNDDWADEF GRQVAEGAFG ETSADGWAEA YDEYMNEQAA LKQQSDASRG VYVFSDLNPY VGHPNPLKEG QELFRKGLLS EAVLALEAEV
501: LKNPENAEGW RLLGIAHAEN DDDQQAIAAM MRAQEADPAN LEVLLSLGVS HTNELEQQAA LKYLYSWLRH HPKYGSIAPQ EQPISFYHAD VARLFTDAAK
601: MAPEDADVHI VLGVLYNLSR EYDKAIESFK TALELKPRDY SLWNKLGATQ ANSVQSSDAI LAYQQALDIK PNYVRAWANM GISYANQGMY EDSIRYYVRA
701: LAMNPKADNA WQYLRISLSC ASRNDMLEAC DSRNIDVLQK EFPL
001: MAMRDLVNGG AACAVPGSSS SSNPLGALTN ALLGSSSKTQ ERLKEIPNAN RSGPRPQFYS EDQQIRSLPG SELDQPLLQP GAQGSEFFRG FRSVDQNGLG
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL
Arabidopsis Description
PEX5Peroxisome biogenesis protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.