Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67858 | Canola | cytosol | 28.71 | 94.57 |
| Bra028938.1-P | Field mustard | plastid | 93.27 | 93.01 |
| CDY11941 | Canola | plastid | 92.99 | 92.74 |
| CDY49390 | Canola | plastid | 86.4 | 90.24 |
| CDY36789 | Canola | plastid | 93.27 | 89.93 |
| Bra002826.1-P | Field mustard | plastid | 90.93 | 86.88 |
| CDY66435 | Canola | cytosol | 13.05 | 81.9 |
| CDY66434 | Canola | cytosol, nucleus, plastid | 28.02 | 72.08 |
| VIT_19s0015g01940.t01 | Wine grape | plastid | 70.88 | 70.11 |
| KRH56371 | Soybean | plastid | 69.92 | 69.16 |
| KRH62568 | Soybean | plastid | 70.05 | 69.11 |
| Solyc10g005650.2.1 | Tomato | plastid | 69.64 | 68.15 |
| PGSC0003DMT400029209 | Potato | cytosol, plastid | 69.51 | 68.01 |
| GSMUA_Achr7P20310_001 | Banana | plastid | 67.03 | 64.38 |
| EES15431 | Sorghum | plastid | 61.13 | 60.63 |
| Os08t0500100-02 | Rice | cytosol | 60.99 | 60.33 |
| Zm00001d031327_P009 | Maize | plastid | 60.85 | 59.86 |
| TraesCS7B01G137000.2 | Wheat | cytosol, plastid | 60.71 | 59.09 |
| TraesCS7A01G241500.5 | Wheat | cytosol, plastid | 60.71 | 59.09 |
| HORVU7Hr1G049220.10 | Barley | plastid | 60.44 | 58.82 |
| TraesCS7D01G240500.3 | Wheat | cytosol, plastid | 59.62 | 57.94 |
| Zm00001d052851_P002 | Maize | plastid | 58.65 | 55.53 |
| TraesCS6A01G105000.1 | Wheat | plastid | 51.65 | 53.03 |
| CDY20736 | Canola | extracellular | 4.12 | 46.88 |
| Bra035613.1-P | Field mustard | extracellular, mitochondrion | 5.91 | 36.44 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:23.4.1.1.1 | EntrezGene:835728 | ProteinID:AED96745.1 | EMBL:AF074843 | ArrayExpress:AT5G56290 |
| EnsemblPlantsGene:AT5G56290 | RefSeq:AT5G56290 | TAIR:AT5G56290 | RefSeq:AT5G56290-TAIR-G | EnsemblPlants:AT5G56290.1 | TAIR:AT5G56290.1 |
| EMBL:AY056299 | EMBL:AY096679 | Unigene:At.10824 | ProteinID:BAB11256.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005052 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005778 | GO:GO:0005829 | GO:GO:0006625 | GO:GO:0006810 |
| GO:GO:0007031 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009987 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016560 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| RefSeq:NP_200440.1 | Symbol:PEX5 | PFAM:PF00515 | PFAM:PF13181 | PFAM:PF13432 | PO:PO:0000013 |
| PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR10130 | PANTHER:PTHR10130:SF0 | InterPro:PTS1R_family | UniProt:Q9FMA3 |
| SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| UniParc:UPI00000A4E3F | SEG:seg | : | : | : | : |
Description
PEX5Peroxisome biogenesis protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA3]
Coordinates
chr5:+:22786496..22792306
Molecular Weight (calculated)
80916.0 Da
IEP (calculated)
4.458
GRAVY (calculated)
-0.578
Length
728 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMRDLVNGG AACAVPGSSS SSNPLGALTN ALLGSSSKTQ ERLKEIPNAN RSGPRPQFYS EDQQIRSLPG SELDQPLLQP GAQGSEFFRG FRSVDQNGLG
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.