Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G137000.2 | Wheat | cytosol, plastid | 97.06 | 97.19 |
| TraesCS7A01G241500.5 | Wheat | cytosol, plastid | 97.06 | 97.19 |
| HORVU7Hr1G049220.10 | Barley | plastid | 93.46 | 93.58 |
| Os08t0500100-02 | Rice | cytosol | 84.38 | 85.87 |
| EES15431 | Sorghum | plastid | 82.38 | 84.06 |
| Zm00001d031327_P009 | Maize | plastid | 82.11 | 83.11 |
| CDY67858 | Canola | cytosol | 23.5 | 79.64 |
| Zm00001d052851_P002 | Maize | plastid | 78.24 | 76.2 |
| CDY66435 | Canola | cytosol | 10.95 | 70.69 |
| GSMUA_Achr7P20310_001 | Banana | plastid | 66.22 | 65.44 |
| VIT_19s0015g01940.t01 | Wine grape | plastid | 62.62 | 63.72 |
| Solyc10g005650.2.1 | Tomato | plastid | 61.28 | 61.69 |
| PGSC0003DMT400029209 | Potato | cytosol, plastid | 61.15 | 61.56 |
| CDY49390 | Canola | plastid | 56.48 | 60.69 |
| KRH56371 | Soybean | plastid | 59.28 | 60.33 |
| KRH62568 | Soybean | plastid | 59.15 | 60.03 |
| AT5G56290.1 | Thale cress | plastid | 57.94 | 59.62 |
| CDY11941 | Canola | plastid | 57.41 | 58.9 |
| Bra028938.1-P | Field mustard | plastid | 57.28 | 58.77 |
| CDY36789 | Canola | plastid | 57.28 | 56.82 |
| Bra002826.1-P | Field mustard | plastid | 56.74 | 55.77 |
| CDY66434 | Canola | cytosol, nucleus, plastid | 18.16 | 48.06 |
| CDY69423 | Canola | plastid | 26.57 | 45.85 |
| CDY20736 | Canola | extracellular | 3.47 | 40.62 |
| Bra035613.1-P | Field mustard | extracellular, mitochondrion | 5.07 | 32.2 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:23.4.1.1.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006625 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF13181 | PFAM:PF13414 | PFAM:PF13432 |
| PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR10130 | PANTHER:PTHR10130:SF0 | InterPro:PTS1R_family | SMART:SM00028 |
| SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | EnsemblPlantsGene:TraesCS7D01G240500 | EnsemblPlants:TraesCS7D01G240500.3 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:204865072..204876758
Molecular Weight (calculated)
82592.4 Da
IEP (calculated)
4.650
GRAVY (calculated)
-0.614
Length
749 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTRHLITGN TSCPTDEASS SNNPLAAFAN KVFGQSHKAE SLKGLPGVSV NVPTTSDYST TPLSTVPGSE NEFKQDQRPF ARGADFMRGS PANDWVESFR
101: PPGHSAFGGP GANFAEFEQI YNNAGPTLGP ALDGPPQRVL SGVLHSFLSS GRAGVPFQPV PVPALGLSEA DKQCIRDRSC IMARHILADQ PEEYIQAQVN
201: TLLHSLDIDN SHRMKNPLHG PYPEMEEYWN QSQSALRSGP MHNAANNWIS ESGKQNNNPE GWITEFGKQN NNPEGWAHSF EQQYGPNGWA SEFEQHQSQM
301: AMGQMGGANM ANLAAMQQSR MLAETLSSNN DPKFQNSKFF QFVSKMSRGE LIIEDNQVKQ GSASQSNGWA DEFQTQHNAN ANSWADQFVH EELSQGADNW
401: VSEFSSEQNQ SGLKEKWVDE FSKLNMDDWA EEFSGGAFGE SSADPWADEF QNQLSASKSS GASRGVYVFS EMNPYVGHPN PMQEGQELFR KGLLSEAALA
501: LEAEVLKNPD NAEGWRLLGV THAENDDDQQ AIAAMLRAQE ANPTNLEVLL ALGVSHTNEL EQGEALRYLS RWLQNHPKYG ALAAPHQTDS PYGPDVVRLF
601: NEAAQMSPED ADVHIVLGVL YNLSREYDKA IASFKTALQL KPQDYSLWNK LGATQANSIQ SADAVLAYQQ ALDLKPNYVR AWANMGISYA NQGLYEDSIR
701: YYVRAVSMNP KADNAWQYLR ISLGNASRSD MIAACDSRNL DVLQKEFPL
101: PPGHSAFGGP GANFAEFEQI YNNAGPTLGP ALDGPPQRVL SGVLHSFLSS GRAGVPFQPV PVPALGLSEA DKQCIRDRSC IMARHILADQ PEEYIQAQVN
201: TLLHSLDIDN SHRMKNPLHG PYPEMEEYWN QSQSALRSGP MHNAANNWIS ESGKQNNNPE GWITEFGKQN NNPEGWAHSF EQQYGPNGWA SEFEQHQSQM
301: AMGQMGGANM ANLAAMQQSR MLAETLSSNN DPKFQNSKFF QFVSKMSRGE LIIEDNQVKQ GSASQSNGWA DEFQTQHNAN ANSWADQFVH EELSQGADNW
401: VSEFSSEQNQ SGLKEKWVDE FSKLNMDDWA EEFSGGAFGE SSADPWADEF QNQLSASKSS GASRGVYVFS EMNPYVGHPN PMQEGQELFR KGLLSEAALA
501: LEAEVLKNPD NAEGWRLLGV THAENDDDQQ AIAAMLRAQE ANPTNLEVLL ALGVSHTNEL EQGEALRYLS RWLQNHPKYG ALAAPHQTDS PYGPDVVRLF
601: NEAAQMSPED ADVHIVLGVL YNLSREYDKA IASFKTALQL KPQDYSLWNK LGATQANSIQ SADAVLAYQQ ALDLKPNYVR AWANMGISYA NQGLYEDSIR
701: YYVRAVSMNP KADNAWQYLR ISLGNASRSD MIAACDSRNL DVLQKEFPL
001: MAMRDLVNGG AACAVPGSSS SSNPLGALTN ALLGSSSKTQ ERLKEIPNAN RSGPRPQFYS EDQQIRSLPG SELDQPLLQP GAQGSEFFRG FRSVDQNGLG
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL
Arabidopsis Description
PEX5Peroxisome biogenesis protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.