Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15431 | Sorghum | plastid | 86.35 | 90.46 |
| Zm00001d031327_P009 | Maize | plastid | 86.48 | 89.86 |
| Os08t0500100-02 | Rice | cytosol | 77.89 | 81.39 |
| HORVU7Hr1G049220.10 | Barley | plastid | 78.02 | 80.21 |
| TraesCS7A01G241500.5 | Wheat | cytosol, plastid | 77.63 | 79.81 |
| TraesCS7B01G137000.2 | Wheat | cytosol, plastid | 77.5 | 79.68 |
| TraesCS7D01G240500.3 | Wheat | cytosol, plastid | 76.2 | 78.24 |
| TraesCS6A01G105000.1 | Wheat | plastid | 69.57 | 75.46 |
| CDY67858 | Canola | cytosol | 20.55 | 71.49 |
| GSMUA_Achr7P20310_001 | Banana | plastid | 62.29 | 63.19 |
| VIT_19s0015g01940.t01 | Wine grape | plastid | 58.91 | 61.55 |
| PGSC0003DMT400029209 | Potato | cytosol, plastid | 59.04 | 61.02 |
| Solyc10g005650.2.1 | Tomato | plastid | 58.91 | 60.89 |
| KRH56371 | Soybean | plastid | 56.31 | 58.83 |
| AT5G56290.1 | Thale cress | plastid | 55.53 | 58.65 |
| CDY11941 | Canola | plastid | 55.66 | 58.63 |
| Bra028938.1-P | Field mustard | plastid | 55.66 | 58.63 |
| CDY49390 | Canola | plastid | 53.06 | 58.54 |
| KRH62568 | Soybean | plastid | 56.05 | 58.4 |
| CDY66435 | Canola | cytosol | 8.71 | 57.76 |
| CDY36789 | Canola | plastid | 55.66 | 56.69 |
| Bra002826.1-P | Field mustard | plastid | 53.84 | 54.33 |
| CDY69423 | Canola | plastid | 27.44 | 48.62 |
| CDY66434 | Canola | cytosol, nucleus, plastid | 17.69 | 48.06 |
| Bra035613.1-P | Field mustard | extracellular, mitochondrion | 3.38 | 22.03 |
| CDY20736 | Canola | extracellular | 1.82 | 21.88 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:103654476 | MapMan:23.4.1.1.1 | UniProt:A0A1D6QKF6 | ProteinID:AQK58218.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF13181 |
| PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR10130 | PANTHER:PTHR10130:SF0 | InterPro:PTS1R_family |
| SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00084370FE |
| EnsemblPlantsGene:Zm00001d052851 | EnsemblPlants:Zm00001d052851_P002 | EnsemblPlants:Zm00001d052851_T002 | SEG:seg | : | : |
Description
Peroxisome biogenesis protein 5
Coordinates
chr4:+:202584989..202598984
Molecular Weight (calculated)
85167.6 Da
IEP (calculated)
4.524
GRAVY (calculated)
-0.418
Length
769 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRHLVTGQ NNCAPDGASS SNPLNALANA FLGQSSKAQS IKELPGSVSV PSTSGFSAPA PLSNIPGSEN EFKQDQRPFV QGSDFIHGGP ANDWIKSFRP
101: PGVPELGGIE AHFPDFEQIY NNAGTTFQPP LDGPPQRVLS GVLHSFLTSG PAGVPFQPLP VPAALGLSES DKQCIRDRSC IMARHIFSDQ PEEYIQAQVN
201: TLLHSLDIDN RMRGPMHGQY PELQEYWNQS QSSMGPALMH NTADKWITEF GKQNNNPENW AKSFEQQYGP NGWASEFEQH QSQMAMGQMG GVNMANLAAM
301: EQSRMLAQTL ARPDNTIFFL FEKNSKFFQF VSKMSRGELI IEDNQVKEGL ASQSSGWADE FQTQYKANAN SWADQFAREE LSQGADKWVS EFSSQHNQGA
401: LNESWVDEFS KLNVTDEWAE EFSGGGFGES SADPWVDEFQ EHLSSFKQSS GASRGVYVYS ENNPYVGHPN PMQEGQELFR KGLLSEAVLA LEAEVLKNPD
501: NAEGWRLLGI THAENDDDQQ AIAAMMRALE ANPTNLEVLL ALGVSHTNGY LLAIDAELEQ GEALRYLYRW LQNHPKYGGL VPPQSTDSPY GPDVVRLFND
601: AAQMSPEDAD VHVVLGVLYN LSREYDKAIT SFKTAVQLKP QDYSLWNKLG ATQANSIQSA DAILAYQQAL DLKPNYVRAW ANMGISYANQ VILLCNWFLP
701: GFLRCIALAH DLITPIDANP SMLLTQGLYE DSIRYYVRAV TMNPKADNAW QYLRISLGYA LLACDLPTM
101: PGVPELGGIE AHFPDFEQIY NNAGTTFQPP LDGPPQRVLS GVLHSFLTSG PAGVPFQPLP VPAALGLSES DKQCIRDRSC IMARHIFSDQ PEEYIQAQVN
201: TLLHSLDIDN RMRGPMHGQY PELQEYWNQS QSSMGPALMH NTADKWITEF GKQNNNPENW AKSFEQQYGP NGWASEFEQH QSQMAMGQMG GVNMANLAAM
301: EQSRMLAQTL ARPDNTIFFL FEKNSKFFQF VSKMSRGELI IEDNQVKEGL ASQSSGWADE FQTQYKANAN SWADQFAREE LSQGADKWVS EFSSQHNQGA
401: LNESWVDEFS KLNVTDEWAE EFSGGGFGES SADPWVDEFQ EHLSSFKQSS GASRGVYVYS ENNPYVGHPN PMQEGQELFR KGLLSEAVLA LEAEVLKNPD
501: NAEGWRLLGI THAENDDDQQ AIAAMMRALE ANPTNLEVLL ALGVSHTNGY LLAIDAELEQ GEALRYLYRW LQNHPKYGGL VPPQSTDSPY GPDVVRLFND
601: AAQMSPEDAD VHVVLGVLYN LSREYDKAIT SFKTAVQLKP QDYSLWNKLG ATQANSIQSA DAILAYQQAL DLKPNYVRAW ANMGISYANQ VILLCNWFLP
701: GFLRCIALAH DLITPIDANP SMLLTQGLYE DSIRYYVRAV TMNPKADNAW QYLRISLGYA LLACDLPTM
001: MAMRDLVNGG AACAVPGSSS SSNPLGALTN ALLGSSSKTQ ERLKEIPNAN RSGPRPQFYS EDQQIRSLPG SELDQPLLQP GAQGSEFFRG FRSVDQNGLG
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL
101: AAWDEVQQGG PMPPMGPMFE PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF FADRGEEFIN SQVNALLSSL
201: DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT
301: RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF
401: SKLNVDDWID EFAEGPVGDS SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL EAEVMKNPEN AEGWRLLGVT
501: HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY
601: NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL
701: SLSCASRQDM IEACESRNLD LLQKEFPL
Arabidopsis Description
PEX5Peroxisome biogenesis protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.