Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os08t0500100-02 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G14420.1 | Os08t0500100-02 | AT5G56290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93339 | Sorghum | peroxisome | 91.87 | 92.12 |
| TraesCS5B01G426500.1 | Wheat | golgi | 90.51 | 90.27 |
| TraesCS5D01G432900.1 | Wheat | peroxisome | 90.24 | 90.0 |
| TraesCS5A01G424400.1 | Wheat | peroxisome | 89.97 | 89.73 |
| Os07t0152900-01 | Rice | peroxisome | 89.7 | 89.7 |
| HORVU0Hr1G013900.4 | Barley | peroxisome | 78.05 | 88.07 |
| GSMUA_Achr7P07880_001 | Banana | peroxisome, plasma membrane, unclear | 86.99 | 87.47 |
| KRH43857 | Soybean | peroxisome | 87.8 | 87.33 |
| KRH13608 | Soybean | nucleus | 86.99 | 86.52 |
| Solyc07g056540.2.1 | Tomato | plastid | 86.72 | 86.25 |
| PGSC0003DMT400071115 | Potato | cytosol | 86.72 | 86.25 |
| AT3G14420.1 | Thale cress | peroxisome | 85.37 | 85.83 |
| VIT_19s0093g00510.t01 | Wine grape | peroxisome | 85.64 | 85.18 |
| VIT_10s0003g03830.t01 | Wine grape | peroxisome | 84.55 | 83.87 |
| Os04t0623500-02 | Rice | peroxisome | 82.93 | 83.38 |
| AT3G14415.2 | Thale cress | peroxisome | 83.47 | 82.57 |
| Os08t0198700-01 | Rice | vacuole | 15.18 | 80.0 |
| GSMUA_Achr4P22900_001 | Banana | peroxisome | 30.35 | 72.73 |
| CDY70372 | Canola | cytosol, mitochondrion, plastid | 21.95 | 69.23 |
| CDX88442 | Canola | cytosol, mitochondrion, plastid | 21.95 | 69.23 |
| Os07t0616500-01 | Rice | peroxisome | 58.54 | 59.02 |
| CDY52449 | Canola | mitochondrion | 33.88 | 57.34 |
| Bra035032.1-P | Field mustard | mitochondrion | 33.88 | 57.34 |
| CDX86782 | Canola | cytosol, peroxisome, plastid | 34.15 | 56.5 |
| Os04t0623600-01 | Rice | extracellular | 10.84 | 40.82 |
| Os03t0786000-01 | Rice | plastid | 11.38 | 15.56 |
Protein Annotations
| MapMan:1.3.2 | Gene3D:3.20.20.70 | ProteinID:ABF99231.1 | EMBL:AK098878 | EMBL:AK120304 | InterPro:Aldolase_TIM |
| InterPro:Alpha-hydoxy_acid_DH_FMN | ProteinID:BAF13401.1 | ProteinID:BAS86730.1 | ProteinID:EEE60058.1 | InterPro:FMN-dep_DH | InterPro:FMN_HAD |
| InterPro:FMN_hydac_DH_AS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003973 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008891 | GO:GO:0009853 | GO:GO:0009854 | GO:GO:0009987 | GO:GO:0010109 |
| GO:GO:0010181 | GO:GO:0015979 | GO:GO:0016032 | GO:GO:0016491 | GO:GO:0019048 | GO:GO:0052852 |
| GO:GO:0052853 | GO:GO:0052854 | GO:GO:0055114 | InterPro:IPR013785 | InterPro:IPR037396 | EnsemblPlantsGene:Os03g0786100 |
| EnsemblPlants:Os03t0786100-01 | PFAM:PF01070 | PIRSF:PIRSF000138 | ScanProsite:PS00557 | PFscan:PS51349 | PANTHER:PTHR10578 |
| PANTHER:PTHR10578:SF80 | UniProt:Q10CE4 | SMART:SM01240 | SUPFAM:SSF51395 | UniParc:UPI0000DB4EDA | SEG:seg |
Description
GLYCOLATE OXIDASE 1Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment). (Os03t0786100-01);Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment). (Os03t0786100-02)
Coordinates
chr3:+:32628790..32632431
Molecular Weight (calculated)
40386.0 Da
IEP (calculated)
8.802
GRAVY (calculated)
0.044
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEITNVMEY QAIAKQKLPK MIYDYYASGA EDEWTLKENR EAFSRILFRP RILIDVSKID MSATVLGFKI SMPIMIAPSA MQKMAHPDGE YATARAASAA
101: GTIMTLSSWA TSSVEEVAST GPGIRFFQLY VYKDRNVVEQ LVRRAERAGF KAIALTVDTP RLGRREADIK NRFVLPPYLT LKNFEGLDLA EMDKSNDSGL
201: ASYVAGQIDR TLSWKDVKWL QSITSLPILV KGVITAEDAR LAVHSGAAGI IVSNHGARQL DYVPATISAL EEVVTAAAGR IPVYLDGGVR RGTDVFKALA
301: LGAAGVFIGR PVVFALAAEG EAGVRNVLRM MREEFELTMA LSGCTSLADI TRAHIYTDAD RLARPFPRL
101: GTIMTLSSWA TSSVEEVAST GPGIRFFQLY VYKDRNVVEQ LVRRAERAGF KAIALTVDTP RLGRREADIK NRFVLPPYLT LKNFEGLDLA EMDKSNDSGL
201: ASYVAGQIDR TLSWKDVKWL QSITSLPILV KGVITAEDAR LAVHSGAAGI IVSNHGARQL DYVPATISAL EEVVTAAAGR IPVYLDGGVR RGTDVFKALA
301: LGAAGVFIGR PVVFALAAEG EAGVRNVLRM MREEFELTMA LSGCTSLADI TRAHIYTDAD RLARPFPRL
001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL
Arabidopsis Description
GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.