Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35448 | Canola | peroxisome | 97.35 | 97.35 |
| Solyc03g122150.2.1 | Tomato | peroxisome | 58.41 | 43.14 |
| CDY39100 | Canola | peroxisome | 87.61 | 27.58 |
| CDY33247 | Canola | peroxisome | 88.5 | 27.55 |
| CDX82499 | Canola | peroxisome | 82.3 | 25.76 |
| AT3G14150.1 | Thale cress | peroxisome | 82.3 | 25.62 |
| CDX75747 | Canola | peroxisome | 82.3 | 25.62 |
| CDY52266 | Canola | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 84.07 | 25.61 |
| CDY52265 | Canola | peroxisome | 79.65 | 24.93 |
| AT3G14130.1 | Thale cress | peroxisome | 79.65 | 24.79 |
| CDY39098 | Canola | peroxisome | 66.37 | 22.12 |
| VIT_09s0002g00810.t01 | Wine grape | peroxisome | 70.8 | 21.98 |
| PGSC0003DMT400058959 | Potato | peroxisome | 68.14 | 21.15 |
| PGSC0003DMT400058920 | Potato | peroxisome | 66.37 | 20.66 |
| PGSC0003DMT400058960 | Potato | peroxisome | 66.37 | 20.6 |
| Solyc03g122140.2.1 | Tomato | peroxisome | 65.49 | 20.39 |
| VIT_09s0002g00820.t01 | Wine grape | peroxisome, plastid | 72.57 | 19.71 |
| CDY11082 | Canola | peroxisome | 53.98 | 19.61 |
| CDY16268 | Canola | peroxisome | 53.98 | 19.61 |
| CDX81438 | Canola | peroxisome | 53.98 | 19.61 |
| CDY40891 | Canola | peroxisome | 53.98 | 19.61 |
| Solyc03g122170.2.1 | Tomato | peroxisome | 59.29 | 19.53 |
| CDX98451 | Canola | peroxisome | 51.33 | 18.95 |
| PGSC0003DMT400058950 | Potato | peroxisome | 61.06 | 18.3 |
| CDY25424 | Canola | peroxisome | 53.98 | 18.21 |
| CDX68645 | Canola | peroxisome | 53.98 | 18.1 |
| CDY35618 | Canola | peroxisome | 53.98 | 18.1 |
| Solyc03g122130.2.1 | Tomato | peroxisome | 54.87 | 18.08 |
| CDX75771 | Canola | peroxisome | 56.64 | 17.44 |
| CDX82484 | Canola | peroxisome | 56.64 | 17.44 |
| CDY39115 | Canola | peroxisome | 55.75 | 17.17 |
| CDY39114 | Canola | peroxisome | 55.75 | 17.17 |
| CDY33221 | Canola | peroxisome | 55.75 | 17.17 |
| CDX97574 | Canola | peroxisome | 55.75 | 17.03 |
| CDX98453 | Canola | peroxisome | 55.75 | 17.03 |
| CDY55631 | Canola | peroxisome | 54.87 | 16.85 |
| CDY01535 | Canola | peroxisome | 54.87 | 16.85 |
| CDX82483 | Canola | peroxisome | 54.87 | 16.62 |
| CDX78843 | Canola | peroxisome | 53.98 | 16.58 |
| CDX97573 | Canola | peroxisome | 55.75 | 16.54 |
| CDX68646 | Canola | peroxisome | 52.21 | 16.53 |
| CDY25425 | Canola | peroxisome | 52.21 | 16.53 |
| CDX81437 | Canola | peroxisome | 52.21 | 16.53 |
| CDX99474 | Canola | peroxisome | 53.1 | 16.3 |
| CDY33220 | Canola | peroxisome | 51.33 | 16.25 |
| CDX97546 | Canola | peroxisome | 79.65 | 12.53 |
| CDY52449 | Canola | mitochondrion | 21.24 | 11.01 |
| CDX86782 | Canola | cytosol, peroxisome, plastid | 21.24 | 10.76 |
| CDX75772 | Canola | mitochondrion | 23.89 | 9.38 |
| CDX88442 | Canola | cytosol, mitochondrion, plastid | 5.31 | 5.13 |
| CDY70372 | Canola | cytosol, mitochondrion, plastid | 5.31 | 5.13 |
| CDX98452 | Canola | cytosol, nucleus, peroxisome | 0.88 | 3.33 |
| CDX96897 | Canola | peroxisome | 2.65 | 1.72 |
| CDY49371 | Canola | peroxisome | 0.88 | 1.72 |
| CDY40892 | Canola | peroxisome | 1.77 | 1.16 |
Protein Annotations
| Gene3D:3.20.20.70 | MapMan:50.1.1 | GO:A0A078FFJ5 | UniProt:A0A078FFJ5 | InterPro:Aldolase_TIM | EnsemblPlants:CDY13160 |
| ProteinID:CDY13160 | ProteinID:CDY13160.1 | InterPro:FMN-dep_DH | InterPro:FMN_HAD | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00071023001 | InterPro:IPR013785 |
| InterPro:IPR037396 | PFAM:PF01070 | PFscan:PS51349 | PANTHER:PTHR10578 | PANTHER:PTHR10578:SF67 | SUPFAM:SSF51395 |
| UniParc:UPI0004EE6330 | : | : | : | : | : |
Description
BnaC04g26750DBnaC04g26750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFJ5]
Coordinates
chrLK032032:-:75137..76541
Molecular Weight (calculated)
12647.3 Da
IEP (calculated)
4.530
GRAVY (calculated)
-0.012
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQIVNMNEF QELAKLVLPK MYYEFYSGGA EDEHTLKENV EAFTRIMFRP RVLVDVSKID TSTSILGYPI SAPIMIAPTA MHMLAHPEGE TATAKSAAAC
101: NTIMIDISKY EEL
101: NTIMIDISKY EEL
001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML
Arabidopsis Description
GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.