CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40891	Canola	peroxisome	85.95	84.57
CDX81438	Canola	peroxisome	85.95	84.57
CDY16268	Canola	peroxisome	85.95	84.57
CDY11082	Canola	peroxisome	85.95	84.57
CDY25424	Canola	peroxisome	86.27	78.81
CDX68645	Canola	peroxisome	86.27	78.34
CDY35618	Canola	peroxisome	86.27	78.34
CDX68646	Canola	peroxisome	89.54	76.75
CDY25425	Canola	peroxisome	89.54	76.75
CDX81437	Canola	peroxisome	89.54	76.75
CDY33220	Canola	peroxisome	89.22	76.47
Bra005793.1-P	Field mustard	peroxisome	29.09	76.07
CDY39115	Canola	peroxisome	89.22	74.39
CDY33221	Canola	peroxisome	89.22	74.39
CDY39114	Canola	peroxisome	88.89	74.11
CDX75771	Canola	peroxisome	88.89	74.11
CDX82484	Canola	peroxisome	88.89	74.11
CDX97574	Canola	peroxisome	88.89	73.51
CDX98453	Canola	peroxisome	88.89	73.51
CDX82483	Canola	peroxisome	88.89	72.92
CDX97573	Canola	peroxisome	89.22	71.65
AT3G14415.2	Thale cress	peroxisome	86.93	71.31
KRH43857	Soybean	peroxisome	83.01	68.46
VIT_10s0003g03830.t01	Wine grape	peroxisome	82.68	68.01
KRH13608	Soybean	nucleus	82.35	67.92
PGSC0003DMT400071115	Potato	cytosol	82.03	67.66
Solyc07g056540.2.1	Tomato	plastid	82.03	67.66
CDX75772	Canola	mitochondrion	62.75	66.67
CDY70372	Canola	cytosol, mitochondrion, plastid	24.84	64.96
CDX88442	Canola	cytosol, mitochondrion, plastid	24.84	64.96
CDY55631	Canola	peroxisome	77.45	64.4
CDY01535	Canola	peroxisome	76.8	63.86
CDX78843	Canola	peroxisome	73.2	60.87
CDX99474	Canola	peroxisome	72.22	60.05
CDY52449	Canola	mitochondrion	39.54	55.5
CDX86782	Canola	cytosol, peroxisome, plastid	39.87	54.71
CDY40892	Canola	peroxisome	29.41	52.02
CDY35448	Canola	peroxisome	18.95	51.33
CDY13160	Canola	peroxisome	18.95	51.33
CDY39098	Canola	peroxisome	51.96	46.9
CDY39100	Canola	peroxisome	54.25	46.24
CDX75747	Canola	peroxisome	54.58	46.01
CDY33247	Canola	peroxisome	54.58	46.01
CDY52265	Canola	peroxisome	52.29	44.32
CDX82499	Canola	peroxisome	52.29	44.32
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	52.29	43.13
GSMUA_Achr4P22900_001	Banana	peroxisome	21.57	42.86
CDX96897	Canola	peroxisome	22.88	40.23
CDY49371	Canola	peroxisome	6.86	36.21
CDX97546	Canola	peroxisome	52.94	22.56
CDX98452	Canola	cytosol, nucleus, peroxisome	0.65	6.67

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.1	GO:A0A078EB83	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	EnsemblPlants:CDX98451
ProteinID:CDX98451	ProteinID:CDX98451.1	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00106063001	InterPro:IPR013785	InterPro:IPR037396	PFAM:PF01070
ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF80	SUPFAM:SSF51395	UniParc:UPI0004EE9AA5
SEG:seg	:	:	:	:	:

Description

BnaC05g39240D

Coordinates

chrLK031905:+:176335..178912

Molecular Weight (calculated)

33965.3 Da

IEP (calculated)

9.741

GRAVY (calculated)

-0.076

Length

306 amino acids

Sequence
(BLAST)

001: MEITNVTEYE AIAKEKLPKM DEWTLQENRN AFARILFRPR ILIDVSKIDM TTTILGFKIS MPIMVAPTAM QKMAHPEGEY ATARAASAAG TIMTLSSWTT
101: SSVEEVASTG PGIRFFQIRF FQLQVYKNRK VVEQLVRRAE RAGFKAIVLT ADAPRLGRRE SDIKNRFTLP PNLALKNFEG LDLGKMGEAN DSGLASYVDG
201: QIDRTLSWKD VQWLQTITKM PILVKGVLTG EDARIAIQAG AAGIIVSNHG GRQLDYVPAT ISALEEVVKA TQGRVPVFLD GGVRRGTCTW SFRDIYWKTS
301: VVLTCC

Best Arabidopsis Sequence Match ( AT3G14415.1 )
(BLAST)

001: MEITNVTEYD AIAKAKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVNKIDM ATTVLGFKIS MPIMVAPTAF QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDIQWLQ TITNMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFALAAEGE AGVKKVLQML RDEFELTMAL SGCRSLSEIT RNHIVTEWDT PRHLPRL

Arabidopsis Description

GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.