CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82484	Canola	peroxisome	99.73	99.73
CDY33221	Canola	peroxisome	99.18	99.18
CDY25425	Canola	peroxisome	96.46	99.16
CDX68646	Canola	peroxisome	96.46	99.16
CDX81437	Canola	peroxisome	96.46	99.16
CDY39114	Canola	peroxisome	98.91	98.91
CDY39115	Canola	peroxisome	97.0	97.0
CDY33220	Canola	peroxisome	94.28	96.92
CDX98453	Canola	peroxisome	96.19	95.41
CDX97574	Canola	peroxisome	96.19	95.41
AT3G14415.2	Thale cress	peroxisome	96.73	95.17
CDX82483	Canola	peroxisome	96.73	95.17
CDY40892	Canola	peroxisome	44.41	94.22
CDX98452	Canola	cytosol, nucleus, peroxisome	7.63	93.33
Solyc07g056540.2.1	Tomato	plastid	92.37	91.37
CDY40891	Canola	peroxisome	76.84	90.68
CDX81438	Canola	peroxisome	76.84	90.68
CDY11082	Canola	peroxisome	76.84	90.68
CDY16268	Canola	peroxisome	76.84	90.68
PGSC0003DMT400071115	Potato	cytosol	91.01	90.03
KRH43857	Soybean	peroxisome	90.46	89.49
CDX98451	Canola	peroxisome	74.11	88.89
CDX97573	Canola	peroxisome	92.1	88.71
VIT_10s0003g03830.t01	Wine grape	peroxisome	89.65	88.44
KRH13608	Soybean	nucleus	89.37	88.41
CDY25424	Canola	peroxisome	79.02	86.57
CDX68645	Canola	peroxisome	77.93	84.87
CDY35618	Canola	peroxisome	77.93	84.87
CDY55631	Canola	peroxisome	85.01	84.78
CDY01535	Canola	peroxisome	84.47	84.24
CDX78843	Canola	peroxisome	80.38	80.16
CDX99474	Canola	peroxisome	79.84	79.62
GSMUA_Achr4P22900_001	Banana	peroxisome	32.97	78.57
CDX75772	Canola	mitochondrion	54.22	69.1
CDX88442	Canola	cytosol, mitochondrion, plastid	21.8	68.38
CDY70372	Canola	cytosol, mitochondrion, plastid	21.8	68.38
CDY33247	Canola	peroxisome	60.49	61.16
CDY39100	Canola	peroxisome	59.67	61.0
CDY39098	Canola	peroxisome	55.86	60.47
CDX75747	Canola	peroxisome	58.58	59.23
CDX82499	Canola	peroxisome	57.22	58.17
CDY52449	Canola	mitochondrion	34.33	57.8
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	58.31	57.68
CDX86782	Canola	cytosol, peroxisome, plastid	34.88	57.4
CDY52265	Canola	peroxisome	56.13	57.06
CDY35448	Canola	peroxisome	17.44	56.64
CDY13160	Canola	peroxisome	17.44	56.64
CDY49371	Canola	peroxisome	8.45	53.45
CDX96897	Canola	peroxisome	22.62	47.7
CDX97546	Canola	peroxisome	56.68	28.97

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	GO:A0A078CF17	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN	EnsemblPlants:CDX75771
ProteinID:CDX75771	ProteinID:CDX75771.1	InterPro:FMN-dep_DH	InterPro:FMN_HAD	InterPro:FMN_hydac_DH_AS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00123713001	InterPro:IPR013785	InterPro:IPR037396	PFAM:PF01070
PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578	PANTHER:PTHR10578:SF80	SUPFAM:SSF51395
UniParc:UPI0004EDEB7E	SEG:seg	:	:	:	:

Description

BnaC03g38540D

Coordinates

chrLK031805:+:474456..477015

Molecular Weight (calculated)

40399.0 Da

IEP (calculated)

9.402

GRAVY (calculated)

-0.051

Length

367 amino acids

Sequence
(BLAST)

001: MEITNVTEYE AIAKEKLPKM VYDYYASGAE DQWTLKENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPEGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITSMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLSEIT RNHIVTEWET PRHLPRL

Best Arabidopsis Sequence Match ( AT3G14415.1 )
(BLAST)

001: MEITNVTEYD AIAKAKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVNKIDM ATTVLGFKIS MPIMVAPTAF QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDIQWLQ TITNMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFALAAEGE AGVKKVLQML RDEFELTMAL SGCRSLSEIT RNHIVTEWDT PRHLPRL

Arabidopsis Description

GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.