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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52265 Canola peroxisome 49.3 98.06
CDY49371 Canola peroxisome 6.96 86.21
CDY33247 Canola peroxisome 41.36 81.82
CDX82499 Canola peroxisome 40.95 81.44
CDY35448 Canola peroxisome 12.67 80.53
CDY39100 Canola peroxisome 40.25 80.5
CDY39098 Canola peroxisome 37.88 80.24
CDY13160 Canola peroxisome 12.53 79.65
CDY52266 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 41.09 79.51
CDX75747 Canola peroxisome 39.97 79.06
VIT_09s0002g00810.t01 Wine grape peroxisome 36.49 71.98
Solyc03g122170.2.1 Tomato peroxisome 33.7 70.55
PGSC0003DMT400058959 Potato peroxisome 35.65 70.33
Solyc03g122130.2.1 Tomato peroxisome 32.87 68.8
PGSC0003DMT400058960 Potato peroxisome 33.84 66.76
PGSC0003DMT400058920 Potato peroxisome 33.7 66.67
Solyc03g122140.2.1 Tomato peroxisome 33.29 65.84
VIT_09s0002g00820.t01 Wine grape peroxisome, plastid 37.88 65.38
Bra027370.1-P Field mustard vacuole 83.15 59.64
PGSC0003DMT400058950 Potato peroxisome 31.2 59.42
CDX96897 Canola peroxisome 14.21 58.62
CDX75771 Canola peroxisome 28.97 56.68
CDX82484 Canola peroxisome 28.97 56.68
CDY39114 Canola peroxisome 28.83 56.4
CDY33221 Canola peroxisome 28.83 56.4
CDX82483 Canola peroxisome 29.25 56.3
CDY55631 Canola peroxisome 28.83 56.25
CDX78843 Canola peroxisome 28.83 56.25
CDY40892 Canola peroxisome 13.51 56.07
CDY25425 Canola peroxisome 27.86 56.02
CDX81437 Canola peroxisome 27.86 56.02
CDX68646 Canola peroxisome 27.86 56.02
CDY01535 Canola peroxisome 28.55 55.71
CDX97574 Canola peroxisome 28.69 55.68
CDX98453 Canola peroxisome 28.69 55.68
CDY39115 Canola peroxisome 28.41 55.59
CDY33220 Canola peroxisome 27.58 55.46
CDX99474 Canola peroxisome 28.13 54.89
CDY40891 Canola peroxisome 23.26 53.7
CDY16268 Canola peroxisome 23.26 53.7
CDY11082 Canola peroxisome 23.26 53.7
CDX81438 Canola peroxisome 23.26 53.7
CDX98451 Canola peroxisome 22.56 52.94
Solyc03g122150.2.1 Tomato peroxisome 11.14 52.29
CDX97573 Canola peroxisome 27.72 52.23
CDY25424 Canola peroxisome 24.23 51.94
CDY35618 Canola peroxisome 24.09 51.34
CDX68645 Canola peroxisome 24.09 51.34
CDX75772 Canola mitochondrion 17.55 43.75
CDX98452 Canola cytosol, nucleus, peroxisome 1.81 43.33
CDX88442 Canola cytosol, mitochondrion, plastid 6.27 38.46
CDY70372 Canola cytosol, mitochondrion, plastid 6.27 38.46
CDY52449 Canola mitochondrion 11.14 36.7
CDX86782 Canola cytosol, peroxisome, plastid 11.28 36.32
Protein Annotations
Gene3D:3.20.20.70MapMan:50.1.1GO:A0A078E8P8InterPro:Aldolase_TIMInterPro:Alpha-hydoxy_acid_DH_FMNEnsemblPlants:CDX97546
ProteinID:CDX97546ProteinID:CDX97546.1InterPro:FMN-dep_DHInterPro:FMN_HADInterPro:FMN_hydac_DH_ASGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0010181
GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00104757001InterPro:IPR013785InterPro:IPR037396PFAM:PF01070
ScanProsite:PS00557PFscan:PS51349PANTHER:PTHR10578PANTHER:PTHR10578:SF67SUPFAM:SSF51395UniParc:UPI0004EDF5D6
SEG:seg:::::
Description
BnaA05g25330D
Coordinates
chrLK031900:-:230077..235230
Molecular Weight (calculated)
78860.3 Da
IEP (calculated)
8.452
GRAVY (calculated)
0.080
Length
718 amino acids
Sequence
(BLAST)
001: MDQIVNVNEF QGLVKQALSK MYYDFYGEGA EDQHTFEENL TPCVLLMFRF RPRVLVDVSK IDTSTRILGY PISSPIMIAP TAMHMLAHPQ GETATAKAAA
101: ACNTIMIVSF MASCTIEDVA SSCNAVRFLQ IYQREVTAQM VKRAEKAGFK AIVLTVDVPK LGRREADIKN KLISPKLKNF EGLFSTELRP SEGSGMEAVA
201: SRGLDASFSW KDIEWLRSIT KLPILVKGIL TREDGKIHCC GSWCRWDSFV SNHGARQLDY SPATITVLEE VVHVVGRRVP VLLDGGIRRG TDVFKALALG
301: AKAVLIGRPV VYGLAAKGED GVKKVIDIPS KDEPRSHLSW SLISFGFSVA SFSLLFNMDQ IVNVNEFQEM AKRALPKMYY DYFYGGAEDE HTVKENVEAF
401: HRIMFRPRVL VDVSKIDMST SVLGYPISAP IMIAPVALLK LAHPEGEIAT ARAAAACNTI MIVSYMASCT IEEVASSCNA VRFLQIYVFK KHEIAQMVIR
501: AEKAGFKAIV LTNAPRIGKR EADIKNKMIS PQLKNFGGLF PTEVQPIKGS GLETLSSTAL DSSFGWKDIE WLRSITKLPI LIKGILTRED ALKAVEAGVD
601: GIVVSNHGGR QLDYSPATIT VLEEVVHVVR GRIPVLFDGG VRRGTDVFKA LALGAQAVLI GRPLAYALAA KGEDGVKQGI EMLKNEFELT MALSGCPTIG
701: DITRNHVKAE AERLHSML
Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)
001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML
Arabidopsis Description
GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.