CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25425	Canola	peroxisome	100.0	100.0
CDX68646	Canola	peroxisome	100.0	100.0
CDY33220	Canola	peroxisome	97.48	97.48
CDX82484	Canola	peroxisome	99.44	96.73
CDX75771	Canola	peroxisome	99.16	96.46
Bra001550.1-P	Field mustard	peroxisome	98.88	96.19
CDY33221	Canola	peroxisome	98.88	96.19
CDY39114	Canola	peroxisome	98.6	95.91
CDY39115	Canola	peroxisome	97.48	94.82
CDY40892	Canola	peroxisome	45.94	94.8
CDX98453	Canola	peroxisome	96.64	93.24
CDX97574	Canola	peroxisome	96.64	93.24
CDX82483	Canola	peroxisome	96.36	92.23
AT3G14415.2	Thale cress	peroxisome	96.36	92.23
CDX98452	Canola	cytosol, nucleus, peroxisome	7.56	90.0
CDX98451	Canola	peroxisome	76.75	89.54
Solyc07g056540.2.1	Tomato	plastid	91.88	88.41
CDY40891	Canola	peroxisome	76.19	87.46
CDY16268	Canola	peroxisome	76.19	87.46
CDY11082	Canola	peroxisome	76.19	87.46
CDX81438	Canola	peroxisome	76.19	87.46
PGSC0003DMT400071115	Potato	cytosol	90.76	87.33
KRH43857	Soybean	peroxisome	90.48	87.06
CDX97573	Canola	peroxisome	92.44	86.61
KRH13608	Soybean	nucleus	89.64	86.25
VIT_10s0003g03830.t01	Wine grape	peroxisome	89.64	86.02
CDY25424	Canola	peroxisome	78.43	83.58
CDY55631	Canola	peroxisome	84.59	82.07
CDX68645	Canola	peroxisome	77.31	81.9
CDY35618	Canola	peroxisome	77.31	81.9
CDY01535	Canola	peroxisome	84.03	81.52
GSMUA_Achr4P22900_001	Banana	peroxisome	33.89	78.57
CDX78843	Canola	peroxisome	79.83	77.45
CDX99474	Canola	peroxisome	79.27	76.9
CDX75772	Canola	mitochondrion	55.46	68.75
CDX88442	Canola	cytosol, mitochondrion, plastid	22.41	68.38
CDY70372	Canola	cytosol, mitochondrion, plastid	22.41	68.38
CDY39098	Canola	peroxisome	57.7	60.77
CDY39100	Canola	peroxisome	59.94	59.61
CDY33247	Canola	peroxisome	60.5	59.5
CDX75747	Canola	peroxisome	58.54	57.58
CDY52449	Canola	mitochondrion	35.01	57.34
CDX82499	Canola	peroxisome	57.14	56.51
CDX86782	Canola	cytosol, peroxisome, plastid	35.29	56.5
CDY52266	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	58.26	56.06
CDY52265	Canola	peroxisome	55.46	54.85
CDY49371	Canola	peroxisome	8.68	53.45
CDY35448	Canola	peroxisome	16.53	52.21
CDY13160	Canola	peroxisome	16.53	52.21
CDX96897	Canola	peroxisome	23.25	47.7
CDX97546	Canola	peroxisome	56.02	27.86

Protein Annotations

MapMan:1.3.2	Gene3D:3.20.20.70	GO:A0A078CXF9	UniProt:A0A078CXF9	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN
EnsemblPlants:CDX81437	ProteinID:CDX81437	ProteinID:CDX81437.1	ProteinID:CDY25425.1	InterPro:FMN-dep_DH	InterPro:FMN_HAD
InterPro:FMN_hydac_DH_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00135020001	InterPro:IPR013785
InterPro:IPR037396	PFAM:PF01070	PIRSF:PIRSF000138	ScanProsite:PS00557	PFscan:PS51349	PANTHER:PTHR10578
PANTHER:PTHR10578:SF80	SUPFAM:SSF51395	UniParc:UPI0004EECC49	SEG:seg	:	:

Description

BnaC09g08480DBnaC01g08070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078CXF9]

Coordinates

chrLK031824:+:1787490..1790037

Molecular Weight (calculated)

39307.8 Da

IEP (calculated)

9.710

GRAVY (calculated)

-0.038

Length

357 amino acids

Sequence
(BLAST)

001: MEITNVTEYE AIAKEKLPKM DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTILGFKIS MPIMVAPTAM QKMAHPEGEY ATARAASAAG TIMTLSSWAT
101: SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA SYVAGQIDRT
201: LSWKDVQWLQ TITSMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL GASGIFIGRP
301: VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLTEIT RNHIVTEWET PRHLPRL

Best Arabidopsis Sequence Match ( AT3G14415.1 )
(BLAST)

001: MEITNVTEYD AIAKAKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVNKIDM ATTVLGFKIS MPIMVAPTAF QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDIQWLQ TITNMPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRV PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFALAAEGE AGVKKVLQML RDEFELTMAL SGCRSLSEIT RNHIVTEWDT PRHLPRL

Arabidopsis Description

GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.