Factsheet for Zm00001d006868_P007

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90257	Sorghum	peroxisome	79.01	91.28
OQU90259	Sorghum	peroxisome	74.76	86.14
TraesCS2D01G175900.1	Wheat	peroxisome	69.58	80.6
HORVU2Hr1G030930.2	Barley	peroxisome	69.1	80.05
TraesCS2A01G168400.1	Wheat	peroxisome	68.87	79.78
Os07t0616500-01	Rice	peroxisome	67.92	78.69
TraesCS5A01G266500.2	Wheat	peroxisome	67.69	78.42
TraesCS5D01G274300.1	Wheat	peroxisome	66.75	77.32
TraesCS5B01G266100.1	Wheat	peroxisome	66.04	76.71
GSMUA_Achr3P01940_001	Banana	peroxisome	58.02	67.58
VIT_09s0002g00810.t01	Wine grape	peroxisome	53.07	61.81
PGSC0003DMT400058960	Potato	peroxisome	52.12	60.71
AT3G14130.1	Thale cress	peroxisome	51.89	60.61
Bra021533.1-P	Field mustard	peroxisome	51.65	60.33
TraesCS2B01G194600.3	Wheat	peroxisome	55.19	59.85
Solyc03g122130.2.1	Tomato	peroxisome	48.35	59.77
AT3G14150.1	Thale cress	peroxisome	50.94	59.5
PGSC0003DMT400058959	Potato	peroxisome	50.71	59.07
Bra021535.1-P	Field mustard	peroxisome	50.47	58.95
PGSC0003DMT400058920	Potato	peroxisome	50.24	58.68
Solyc03g122170.2.1	Tomato	peroxisome	47.41	58.6
Bra001536.1-P	Field mustard	peroxisome	49.76	58.45
Solyc03g122140.2.1	Tomato	peroxisome	49.76	58.13
Bra036980.1-P	Field mustard	peroxisome	7.78	57.89
VIT_09s0002g00820.t01	Wine grape	peroxisome, plastid	53.07	54.09
PGSC0003DMT400058950	Potato	peroxisome	45.99	51.72
Zm00001d002261_P003	Maize	mitochondrion	48.11	51.13
Zm00001d018810_P002	Maize	peroxisome, plastid	49.29	50.0
Solyc03g122150.2.1	Tomato	peroxisome	16.98	47.06
KRH25749	Soybean	vacuole	7.78	39.29
Zm00001d002260_P003	Maize	peroxisome	39.15	34.87
Bra027370.1-P	Field mustard	vacuole	49.76	21.08
Zm00001d023759_P001	Maize	mitochondrion, nucleus, peroxisome	10.38	16.92
Zm00001d024312_P001	Maize	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	3.3	11.76

Protein Annotations

EntrezGene:100193070	Gene3D:3.20.20.70	MapMan:50.1.1	UniProt:A0A1D6F1Q0	InterPro:Aldolase_TIM	InterPro:Alpha-hydoxy_acid_DH_FMN
InterPro:FMN-dep_DH	InterPro:FMN_HAD	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785
InterPro:IPR037396	ProteinID:ONM25362.1	PFAM:PF01070	PIRSF:PIRSF000138	PFscan:PS51349	PANTHER:PTHR10578
PANTHER:PTHR10578:SF67	SUPFAM:SSF51395	UniParc:UPI0008458F1B	EnsemblPlantsGene:Zm00001d006868	EnsemblPlants:Zm00001d006868_P007	EnsemblPlants:Zm00001d006868_T007
SEG:seg	:	:	:	:	:

Description

Peroxisomal (S)-2-hydroxy-acid oxidase GLO4

Coordinates

chr2:+:218291939..218297620

Molecular Weight (calculated)

45799.6 Da

IEP (calculated)

8.200

GRAVY (calculated)

-0.011

Length

424 amino acids

Sequence
(BLAST)

001: MIMLDAATNL ECCPTASNKR MEDNLPVNVR EYQELAKKAL PKMHYDYING GAEDEYTLRE NIAAYGRILL RPRVLIDVSK IDMSTSLLGY NMPSPIIVAP
101: TGAHKLANPE GEVATARAAA ACNTIMMLSF SSSCRIEEVA SSCDAIRFYQ LYVYKRRDVS ATLVRRAESL GFRAIVLTVD TPVLGRREAD IRNKMIAPPL
201: SNLEGLMSLD DFDDAEGGSK LERFSRETLD PSLSWKDVEW LKSITSLPIL LKGIVTAEDA VGSLACLVLN RRTGYLYGHC LVSLNCDDSV AASSSEEGRG
301: GGGGRLDRVQ PRRPAAGLCA GHHLGARRGK VVKAVAGAVP VLVDGGVRRG TDVLKALALG AKAVMVGRPV FFGLAARGEA GARHVIEMLN KELELAMALC
401: GCRSVAEVTR AHVQTEGDRI RALL

Best Arabidopsis Sequence Match ( AT3G14130.1 )
(BLAST)

001: MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC
101: NTIMIVSFMS TCTIEEVASS CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN FEGLVSTEVR PNEGSGVEAF
201: ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA
301: QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK SML

Arabidopsis Description

GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJH5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.