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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 2
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G049220.10

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G14420.1 HORVU7Hr1G049220.10 AT5G56290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G060070.1 Barley peroxisome 41.82 99.36
AT3G14420.1 Thale cress peroxisome 77.75 79.02
Solyc07g056540.2.1 Tomato plastid 78.28 78.71
GSMUA_Achr7P07880_001 Banana peroxisome, plasma membrane, unclear 77.21 78.47
PGSC0003DMT400071115 Potato cytosol 77.48 77.9
KRH43857 Soybean peroxisome 76.68 77.09
AT3G14415.2 Thale cress peroxisome 76.68 76.68
VIT_19s0093g00510.t01 Wine grape peroxisome 76.14 76.55
HORVU0Hr1G013900.4 Barley peroxisome 67.02 76.45
VIT_10s0003g03830.t01 Wine grape peroxisome 75.87 76.08
KRH13608 Soybean nucleus 75.6 76.01
CDY70372 Canola cytosol, mitochondrion, plastid 21.72 69.23
CDX88442 Canola cytosol, mitochondrion, plastid 21.72 69.23
GSMUA_Achr4P22900_001 Banana peroxisome 23.06 55.84
CDY52449 Canola mitochondrion 32.44 55.5
Bra035032.1-P Field mustard mitochondrion 32.44 55.5
CDX86782 Canola cytosol, peroxisome, plastid 32.98 55.16
HORVU2Hr1G030930.2 Barley peroxisome 53.62 54.64
HORVU6Hr1G051600.1 Barley peroxisome, plastid 15.28 50.0
Protein Annotations
MapMan:1.3.2Gene3D:3.20.20.70UniProt:A0A287I4N2InterPro:Aldolase_TIMInterPro:Alpha-hydoxy_acid_DH_FMNInterPro:FMN-dep_DH
InterPro:FMN_HADInterPro:FMN_hydac_DH_ASGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0010181GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:HORVU2Hr1G060010
EnsemblPlants:HORVU2Hr1G060010.5InterPro:IPR013785InterPro:IPR037396PFAM:PF01070PIRSF:PIRSF000138ScanProsite:PS00557
PFscan:PS51349PANTHER:PTHR10578PANTHER:PTHR10578:SF80SUPFAM:SSF51395UniParc:UPI000B4893B5SEG:seg
Description
No Description!
Coordinates
chrchr2H:+:399551357..399565548
Molecular Weight (calculated)
41101.8 Da
IEP (calculated)
10.818
GRAVY (calculated)
-0.265
Length
373 amino acids
Sequence
(BLAST)
001: RRKMEITNVT EYQAIAKQKL PKMIYDYYAS GAEDEWTLQE NREAFARILF RPRILIDVSK IDMTTTILGF KLSMPIMISP TAMQKMAHPD GEYATARAAS
101: AAGTIMTLSS WATSSVEEVA STGPGIRFFQ LYVYKDRRVV EQLVRRAEKA GFKAIALTVD TPRLGRREAD IKNRFVLPQN LTLKNFEGLD LGKMDQANDS
201: GLASYVAGQI DRTLSWKDVK WLQSITTMPI LVKGVITAED SRLAVENGAA GIIVSNHGAR QLDYVPATIS ALEEVVKAAR GQIPVFLDGG VRRGTDVFKA
301: LALGAAGVFV NRKAGGVLAG GGRGGRGEQR AQDAARRVRA DHGAQRLQLA SRHHPQPRRH RGRQIRRHAV PLV
Best Arabidopsis Sequence Match ( AT3G14420.2 )
(BLAST)
001: MEITNVTEYD AIAKQKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVSKIDM TTTVLGFKIS MPIMVAPTAM QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRNVVEQL VRRAERAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEANDSGLA
201: SYVAGQIDRT LSWKDVQWLQ TITKLPILVK GVLTGEDARI AIQAGAAGII VSNHGARQLD YVPATISALE EVVKATQGRI PVFLDGGVRR GTDVFKALAL
301: GASGIFIGRP VVFSLAAEGE AGVRKVLQML RDEFELTMAL SGCRSLKEIS RNHITTEWDT PRPSARL
Arabidopsis Description
GLO1Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR9]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.