Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G111000.1 | Wheat | cytosol | 99.03 | 99.03 |
| TraesCS2D01G111700.1 | Wheat | cytosol | 99.03 | 99.03 |
| Os07t0673900-01 | Rice | cytosol | 77.67 | 79.21 |
| Zm00001d007153_P001 | Maize | mitochondrion | 77.67 | 78.43 |
| EER97717 | Sorghum | cytosol | 77.67 | 76.19 |
| TraesCS2B01G460200.1 | Wheat | cytosol | 57.28 | 59.6 |
| HORVU2Hr1G019250.3 | Barley | cytosol | 52.43 | 36.24 |
| TraesCS5B01G147500.1 | Wheat | cytosol | 22.33 | 23.96 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G130000.1 | EnsemblPlantsGene:TraesCS2B01G130000 | InterPro:Hypoxia_induced_domain | InterPro:IPR007667 | PANTHER:PTHR28018 | PANTHER:PTHR28018:SF1 |
| PFAM:PF04588 | PFscan:PS51503 | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2B:-:97394475..97397147
Molecular Weight (calculated)
11258.5 Da
IEP (calculated)
10.040
GRAVY (calculated)
-0.235
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEKGTLQA MRGWVVDHKL RAVGTLWLTG IAGSIAYNWS RSGMKTSVKL IHARLHAQAL TLAALGCSAL VEYYDHQSGS GSKVHDYAKQ FLPSDRNAKK
101: DSV
101: DSV
1: MVESKTKFEE IRKWVSDHKL RTVGCLWLSG ITGSIAYNWS QPAMKTSVKI IHARLHAQAL TLAALAGAAV VEYYDHKTEA TNRYPKFLPP ENLSHKD
Arabidopsis Description
F18C1.18 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.