Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G111000.1 | Wheat | cytosol | 36.91 | 53.4 |
| TraesCS2D01G111700.1 | Wheat | cytosol | 36.91 | 53.4 |
| TraesCS2B01G130000.1 | Wheat | cytosol | 36.24 | 52.43 |
| Os07t0673900-01 | Rice | cytosol | 33.56 | 49.51 |
| EER97717 | Sorghum | cytosol | 33.56 | 47.62 |
| HORVU7Hr1G087030.1 | Barley | extracellular | 18.79 | 47.46 |
| Zm00001d007153_P001 | Maize | mitochondrion | 31.54 | 46.08 |
| HORVU2Hr1G102130.5 | Barley | cytosol | 22.15 | 27.5 |
| HORVU5Hr1G047000.1 | Barley | cytosol, plastid | 10.74 | 16.67 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G019250.3 | EnsemblPlantsGene:HORVU2Hr1G019250 | PANTHER:PTHR28018 | PANTHER:PTHR28018:SF1 | UniParc:UPI000B462FC9 | UniProt:A0A287H919 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:50230911..50233941
Molecular Weight (calculated)
16150.8 Da
IEP (calculated)
8.677
GRAVY (calculated)
0.224
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: APVAEAHAQT DWNRRGELDL IAEAFGGMAE EKGTLQAMRG WVVDHKLRAV GAPRGAPTSA ASLFRVVHCR VIELNPISFC FRRVGFAGTL WLTGIAGSIA
101: YNWSRPGMKT SVKLIHARFV PSVCGEGNCC KLCISFCLGC VQSRVEILC
101: YNWSRPGMKT SVKLIHARFV PSVCGEGNCC KLCISFCLGC VQSRVEILC
1: MVESKTKFEE IRKWVSDHKL RTVGCLWLSG ITGSIAYNWS QPAMKTSVKI IHARLHAQAL TLAALAGAAV VEYYDHKTEA TNRYPKFLPP ENLSHKD
Arabidopsis Description
F18C1.18 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.