Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- peroxisome 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G111000.1 | Wheat | cytosol | 80.2 | 78.64 |
| TraesCS2D01G111700.1 | Wheat | cytosol | 80.2 | 78.64 |
| TraesCS2B01G130000.1 | Wheat | cytosol | 79.21 | 77.67 |
| Zm00001d007153_P001 | Maize | mitochondrion | 78.22 | 77.45 |
| EER97717 | Sorghum | cytosol | 77.23 | 74.29 |
| Os02t0592400-01 | Rice | cytosol | 61.39 | 57.94 |
| HORVU2Hr1G019250.3 | Barley | cytosol | 49.51 | 33.56 |
| Os12t0111600-01 | Rice | nucleus | 33.66 | 32.38 |
| Os11t0112000-01 | Rice | mitochondrion | 28.71 | 32.22 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4344259 | UniProt:A3BNC1 | EMBL:AK120859 | ProteinID:BAT03180.1 | ProteinID:EAZ41060.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0031305 | GO:GO:0033617 |
| GO:GO:0097249 | InterPro:Hypoxia_induced_domain | InterPro:IPR007667 | EnsemblPlantsGene:Os07g0673900 | EnsemblPlants:Os07t0673900-01 | PFAM:PF04588 |
| PFscan:PS51503 | PANTHER:PTHR28018 | PANTHER:PTHR28018:SF1 | UniParc:UPI0000E12C74 | RefSeq:XP_015645481.1 | RefSeq:XP_015645483.1 |
| SEG:seg | : | : | : | : | : |
Description
Hypoxia-Induced Gene Domain 2Hypoxia induced protein, Early stage of hypoxia signalling (Os07t0673900-01)
Coordinates
chr7:+:28484263..28485201
Molecular Weight (calculated)
11270.5 Da
IEP (calculated)
10.102
GRAVY (calculated)
-0.368
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEKSTMQS MREWVVDHKL RAVGTLWLTG VASSIAYNWS RPGMKTSVKI IHARLHAQAL TLAALAGSAL VEYYDHRSGS GSRVHQYAKQ FITPESNPQK
101: E
101: E
1: MAEPKTKVAE IREWIIEHKL RTVGCLWLSG ISGSIAYNWS KPAMKTSVRI IHARLHAQAL TLAALAGAAA VEYYDHKSGA TDRIPKFLKP DNLNKD
Arabidopsis Description
Hypoxia-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q8LG60]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.