Factsheet for Os11t0112000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 3
plasma membrane 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G27760.1	Os11t0171500-01	AT1G35670.1	19130088
AT5G27760.1	Os12t0169800-00	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0111600-01	Rice	nucleus	94.44	80.95
EES09115	Sorghum	nucleus, plastid	68.89	56.88
Zm00001d052333_P001	Maize	cytosol	67.78	55.96
Zm00001d036839_P001	Maize	cytosol, nucleus, plastid	66.67	53.57
Solyc06g050870.2.1	Tomato	plastid	41.11	50.0
KRH73222	Soybean	mitochondrion, plastid	38.89	47.95
TraesCS5B01G147500.1	Wheat	cytosol	50.0	46.88
HORVU5Hr1G047000.1	Barley	cytosol, plastid	50.0	46.88
PGSC0003DMT400071904	Potato	cytosol	41.11	46.25
TraesCS5D01G143900.1	Wheat	cytosol	48.89	45.83
TraesCS5A01G148900.1	Wheat	cytosol	48.89	45.83
VIT_13s0067g02300.t01	Wine grape	plastid	38.89	44.3
GSMUA_AchrUn_...	Banana	plastid	37.78	38.2
KRH31217	Soybean	plastid	42.22	38.0
GSMUA_Achr5P29560_001	Banana	plastid	36.67	37.5
KRG97658	Soybean	plastid	40.0	36.0
CDX86141	Canola	cytosol	33.33	31.25
CDX80621	Canola	cytosol	33.33	31.25
Bra009944.1-P	Field mustard	cytosol	33.33	31.25
CDY25023	Canola	cytosol	32.22	30.21
CDY05562	Canola	cytosol	32.22	30.21
Bra020576.1-P	Field mustard	cytosol	32.22	30.21
AT5G27760.1	Thale cress	cytosol	31.11	29.17
AT3G05550.1	Thale cress	cytosol	31.11	28.87
Os07t0673900-01	Rice	cytosol	32.22	28.71
Os02t0592400-01	Rice	cytosol	33.33	28.04

Protein Annotations

EnsemblPlants:Os11t0112000-01	EnsemblPlantsGene:Os11g0112000	InterPro:Hypoxia_induced_domain	InterPro:IPR007667	PANTHER:PTHR28018	PANTHER:PTHR28018:SF3
PFAM:PF04588	ProteinID:BAT12375.1	SEG:seg	UniParc:UPI0003939198	UniProt:A0A0P0XZ12	MapMan:35.2

Description

Hypoxia-Induced Gene Domain 3, Hypoxia-Induced Gene Domain Protein 3Similar to Hypoxia induced protein conserved region containing protein, expressed. (Os11t0112000-01)

Coordinates

chr11:-:563239..563851

Molecular Weight (calculated)

9901.4 Da

IEP (calculated)

7.832

GRAVY (calculated)

-0.432

Length

90 amino acids

Sequence
(BLAST)

1: TFVYSGGLWA TAVGASVAYG RRKTPQMRLI HARLHAQALT LAVLGGAALA HHYYNPSSNT NNSSSLDYDF YSQLPPATTD DGQENERWSW

Best Arabidopsis Sequence Match ( AT1G26870.1 )
(BLAST)

001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT

Arabidopsis Description

FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.