Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g02300.t01 | Wine grape | plastid | 83.78 | 78.48 |
| PGSC0003DMT400071904 | Potato | cytosol | 75.68 | 70.0 |
| KRH73222 | Soybean | mitochondrion, plastid | 64.86 | 65.75 |
| GSMUA_Achr5P29560_001 | Banana | plastid | 63.51 | 53.41 |
| GSMUA_AchrUn_... | Banana | plastid | 63.51 | 52.81 |
| KRH31217 | Soybean | plastid | 70.27 | 52.0 |
| KRG97658 | Soybean | plastid | 67.57 | 50.0 |
| EES09115 | Sorghum | nucleus, plastid | 68.92 | 46.79 |
| Zm00001d052333_P001 | Maize | cytosol | 66.22 | 44.95 |
| Os12t0111600-01 | Rice | nucleus | 60.81 | 42.86 |
| Os11t0112000-01 | Rice | mitochondrion | 50.0 | 41.11 |
| Zm00001d036839_P001 | Maize | cytosol, nucleus, plastid | 58.11 | 38.39 |
| Solyc01g066720.2.1 | Tomato | cytosol, plastid | 45.95 | 35.05 |
| Solyc01g099820.2.1 | Tomato | cytosol | 44.59 | 33.0 |
| TraesCS5B01G147500.1 | Wheat | cytosol | 35.14 | 27.08 |
| HORVU5Hr1G047000.1 | Barley | cytosol, plastid | 33.78 | 26.04 |
| TraesCS5A01G148900.1 | Wheat | cytosol | 33.78 | 26.04 |
| TraesCS5D01G143900.1 | Wheat | cytosol | 33.78 | 26.04 |
Protein Annotations
| MapMan:35.2 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0031305 |
| GO:GO:0033617 | GO:GO:0097249 | InterPro:Hypoxia_induced_domain | InterPro:IPR007667 | UniProt:K4C5N1 | PFAM:PF04588 |
| PFscan:PS51503 | PANTHER:PTHR28018 | PANTHER:PTHR28018:SF3 | EnsemblPlantsGene:Solyc06g050870.2 | EnsemblPlants:Solyc06g050870.2.1 | TMHMM:TMhelix |
| UniParc:UPI0002766CF8 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:33717638..33718166
Molecular Weight (calculated)
8139.8 Da
IEP (calculated)
10.193
GRAVY (calculated)
-0.080
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MEALQSWISE HKLSSIGTVW ATAVGASLAY SRARTPLKPS LRLIHARMHA QALTLAVLSG AAVYHYYEKN SNDK
1: MVESKTKFEE IRKWVSDHKL RTVGCLWLSG ITGSIAYNWS QPAMKTSVKI IHARLHAQAL TLAALAGAAV VEYYDHKTEA TNRYPKFLPP ENLSHKD
Arabidopsis Description
F18C1.18 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.