Factsheet for TraesCS2B01G209100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G190400.1	Wheat	cytosol	79.0	98.75
Os07t0597000-01	Rice	cytosol, extracellular, plasma membrane	68.0	85.0
TraesCS5B01G108600.1	Wheat	plastid	67.5	84.38
Zm00001d006760_P001	Maize	cytosol	65.5	81.88
Zm00001d022042_P006	Maize	cytosol	65.5	81.88
KXG36613	Sorghum	cytosol	65.0	81.25
TraesCS2B01G279600.1	Wheat	cytosol	65.0	80.75
TraesCS2A01G182600.1	Wheat	mitochondrion	69.5	79.89
TraesCS6B01G411200.1	Wheat	mitochondrion	48.5	56.73

Protein Annotations

MapMan:17.5.3.1	Gene3D:2.30.30.30	Gene3D:2.40.50.140	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003746	GO:GO:0005488	GO:GO:0006412	GO:GO:0006452	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0043022
GO:GO:0045901	GO:GO:0045905	InterPro:IF5A-like	InterPro:IPR014722	InterPro:NA-bd_OB-fold	PFAM:PF01287
PIRSF:PIRSF003025	ScanProsite:PS00302	PANTHER:PTHR11673	PANTHER:PTHR11673:SF22	InterPro:Rib_L2_dom2	SMART:SM01376
SUPFAM:SSF50104	SUPFAM:SSF50249	TIGRFAMs:TIGR00037	EnsemblPlantsGene:TraesCS2B01G209100	EnsemblPlants:TraesCS2B01G209100.1	InterPro:Trans_elong_IF5A_hypusine_site
InterPro:Transl_elong_IF5A_C	InterPro:Translation_prot_SH3-like_sf	TIGR:cd04468	:	:	:

Description

No Description!

Coordinates

chr2B:+:190658232..190661063

Molecular Weight (calculated)

22028.3 Da

IEP (calculated)

7.326

GRAVY (calculated)

-0.421

Length

200 amino acids

Sequence
(BLAST)

001: MRSNPSIRRE LITYHHQRPS VPPSSWRVVI HPAQRVIKVA MSDSEDHHFE SKADAGASKT FPMQAGAIRK GGYLVIKNRP CKVVEVSTSK TGKHGHAKCH
101: FVALDIFNGK KLEDIVPSSH NCDVPHVDRT EYQLIDISED GFVSLLTDNG STKDDLKLPT DDAILTQLKD GFAEGKDLAL TVMSAMGEEQ ICAVKDVGPR

Best Arabidopsis Sequence Match ( AT1G69410.1 )
(BLAST)

001: MSDDEHHFES SDAGASKTYP QQAGNIRKGG HIVIKGRPCK VVEVSTSKTG KHGHAKCHFV AIDIFTSKKL EDIVPSSHNC DVPHVNRVDY QLIDISEDGF
101: VSLLTDNGST KDDLKLPTDE ALLTQLKNGF EEGKDIVVSV MSAMGEEQMC ALKEVGPK

Arabidopsis Description

ELF5A-3Eukaryotic translation initiation factor 5A-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C505]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.