Factsheet for TraesCS2D01G247900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G261900.1	Wheat	golgi, mitochondrion, plasma membrane	96.46	96.46
BAV58157	Barley	endoplasmic reticulum, vacuole	68.14	96.25
TraesCS6A01G161100.1	Wheat	endoplasmic reticulum, plastid, vacuole	68.14	96.25
TraesCS4D01G137900.1	Wheat	endoplasmic reticulum, extracellular	67.26	95.0
TraesCS1D01G196200.1	Wheat	golgi, mitochondrion, plasma membrane	94.69	94.69
TraesCS5D01G079400.1	Wheat	endoplasmic reticulum, extracellular, plastid	60.18	94.44
TraesCS1D01G193500.1	Wheat	mitochondrion	93.81	93.81
TraesCS4D01G139700.1	Wheat	golgi, plastid, vacuole	66.37	93.75
TraesCS3D01G226700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	66.37	93.75
BAC19885	Rice	endoplasmic reticulum, extracellular, vacuole	61.95	93.33
TraesCS5D01G197900.1	Wheat	extracellular	65.49	92.5
TraesCS6D01G261700.1	Wheat	mitochondrion	92.04	92.04
TraesCS3B01G301200.1	Wheat	mitochondrion	90.27	90.27
TraesCS4D01G146000.1	Wheat	extracellular	62.83	88.75
TraesCS4D01G161000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	62.83	88.75
TraesCS2D01G247000.1	Wheat	endoplasmic reticulum, extracellular	61.95	87.5
TraesCS4D01G279600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	61.95	87.5
VIT_00s0438g00020.t01	Wine grape	cytosol	56.64	86.49
GSMUA_AchrUn_...	Banana	plastid	60.18	82.93
PGSC0003DMT400005614	Potato	plastid	51.33	82.86
ATMG01080.1	Thale cress	cytosol, mitochondrion, plasma membrane	61.95	82.35
AT2G07671.1	Thale cress	cytosol, mitochondrion, plasma membrane	61.95	82.35
CDY45507	Canola	cytosol, nucleus, vacuole	61.06	81.18
CDY72393	Canola	cytosol, golgi, vacuole	60.18	80.0
VIT_12s0055g00090.t01	Wine grape	plastid	47.79	76.06
Os01t0899275-00	Rice	mitochondrion	38.05	53.09
CDY17581	Canola	cytosol, peroxisome, plastid	61.95	50.36
Os01t0899350-00	Rice	plastid	36.28	44.57

Protein Annotations

Gene3D:1.20.20.10	MapMan:2.4.6.1.3	InterPro:ATP_synth_F0_csu	InterPro:ATP_synth_F0_csu_DDCD_BS	InterPro:ATP_synth_F0_csu_sf	InterPro:ATPase_proteolipid_c-like_dom
InterPro:F/V-ATP_Csub_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015078	GO:GO:0015986	GO:GO:0015991	GO:GO:0016020	GO:GO:0033177	GO:GO:0045263
InterPro:IPR038662	HAMAP:MF_01396	PFAM:PF00137	PRINTS:PR00124	ScanProsite:PS00605	PANTHER:PTHR10031
PANTHER:PTHR10031:SF14	SUPFAM:SSF81333	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G247900	EnsemblPlants:TraesCS2D01G247900.1	SEG:seg

Description

No Description!

Coordinates

chr2D:+:291774506..291774847

Molecular Weight (calculated)

12237.3 Da

IEP (calculated)

11.718

GRAVY (calculated)

0.290

Length

113 amino acids

Sequence
(BLAST)

001: MEVQAQVLRI INKKSNKEQR RKNVTRKVFS RLEMLEGAKS IGVGAATIAL AGAAVGIGNV LSSLIHSMAR NPSLAKQSFG YAILGFALTE AIALFAPMMA
101: FLISFLFRSH KKS

Best Arabidopsis Sequence Match ( AT2G07671.1 )
(BLAST)

1: MTKREYNSQP EMLEGAKSIG AGAATIASAG AAIGIGNVFS SLIHSVARNP SLAKQSFGYA ILGFALTEAI ALFAPMMAFL ILFVF

Arabidopsis Description

ATP synthase subunit 9, mitochondrial [Source:UniProtKB/TrEMBL;Acc:Q304C3]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.