CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45507	Canola	cytosol, nucleus, vacuole	58.99	96.47
ATMG01080.1	Thale cress	cytosol, mitochondrion, plasma membrane	57.55	94.12
CDY72393	Canola	cytosol, golgi, vacuole	56.83	92.94
BAC19885	Rice	endoplasmic reticulum, extracellular, vacuole	47.48	88.0
TraesCS6A01G109900.1	Wheat	extracellular	41.73	87.88
VIT_00s0438g00020.t01	Wine grape	cytosol	46.76	87.84
TraesCS6A01G208600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.76	87.84
BAV58157	Barley	endoplasmic reticulum, vacuole	50.36	87.5
TraesCS3A01G188800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.04	86.49
TraesCS4D01G137900.1	Wheat	endoplasmic reticulum, extracellular	49.64	86.25
TraesCS1B01G353100.1	Wheat	endoplasmic reticulum, extracellular	48.92	85.0
TraesCS4D01G139700.1	Wheat	golgi, plastid, vacuole	48.92	85.0
TraesCS6A01G161100.1	Wheat	endoplasmic reticulum, plastid, vacuole	48.92	85.0
TraesCS7B01G033600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.92	85.0
TraesCS4A01G161300.1	Wheat	extracellular	48.92	85.0
TraesCS5D01G197900.1	Wheat	extracellular	48.2	83.75
TraesCS2A01G536000.1	Wheat	endoplasmic reticulum, vacuole	48.2	83.75
TraesCS6A01G202700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	48.2	83.75
TraesCS3D01G226700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.2	83.75
TraesCS3B01G364200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.2	83.75
TraesCS5D01G079400.1	Wheat	endoplasmic reticulum, extracellular, plastid	43.17	83.33
PGSC0003DMT400005614	Potato	plastid	41.73	82.86
TraesCS6B01G232800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.48	82.5
TraesCS4D01G146000.1	Wheat	extracellular	47.48	82.5
VIT_12s0055g00090.t01	Wine grape	plastid	41.73	81.69
TraesCS4D01G279600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	46.76	81.25
TraesCS2D01G247000.1	Wheat	endoplasmic reticulum, extracellular	46.04	80.0
TraesCS7B01G120100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.04	80.0
TraesCS4D01G161000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	46.04	80.0
GSMUA_AchrUn_...	Banana	plastid	46.76	79.27
TraesCS7B01G456900.1	Wheat	golgi, mitochondrion, nucleus	51.8	63.72
TraesCS5A01G020000.1	Wheat	golgi, mitochondrion, vacuole	51.8	63.72
TraesCS5A01G208000.1	Wheat	golgi, mitochondrion, plastid	51.08	62.83
TraesCS7A01G098200.1	Wheat	mitochondrion, nucleus, plastid	51.08	62.83
TraesCSU01G262500.1	Wheat	plastid	51.08	62.83
TraesCS4B01G146900.1	Wheat	endoplasmic reticulum, mitochondrion, vacuole	48.2	62.62
HORVU7Hr1G089590.1	Barley	golgi, mitochondrion, plasma membrane	50.36	61.95
TraesCS6B01G233000.1	Wheat	golgi, mitochondrion, plasma membrane	50.36	61.95
TraesCS6D01G261900.1	Wheat	golgi, mitochondrion, plasma membrane	50.36	61.95
TraesCS2D01G247900.1	Wheat	golgi, mitochondrion, plastid	50.36	61.95
TraesCS1D01G196200.1	Wheat	golgi, mitochondrion, plasma membrane	50.36	61.95
TraesCS2B01G264900.1	Wheat	golgi, mitochondrion, plastid	49.64	61.06
TraesCS1D01G193500.1	Wheat	mitochondrion	49.64	61.06
TraesCS6D01G261700.1	Wheat	mitochondrion	48.92	60.18
TraesCS2B01G265300.1	Wheat	mitochondrion	48.92	60.18
TraesCS3B01G301200.1	Wheat	mitochondrion	48.2	59.29
Os01t0899275-00	Rice	mitochondrion	27.34	46.91
Os01t0899350-00	Rice	plastid	25.9	39.13

Protein Annotations

Gene3D:1.20.20.10	MapMan:2.4.6.1.3	GO:A0A078FX52	UniProt:A0A078FX52	InterPro:ATP_synth_F0_csu	InterPro:ATP_synth_F0_csu_DDCD_BS
InterPro:ATP_synth_F0_csu_sf	InterPro:ATPase_proteolipid_c-like_dom	EnsemblPlants:CDY17581	ProteinID:CDY17581	ProteinID:CDY17581.1	InterPro:F/V-ATP_Csub_sf
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289
GO:GO:0009058	GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0015991	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0033177	GO:GO:0045263	EnsemblPlantsGene:GSBRNA2T00001771001	InterPro:IPR038662
HAMAP:MF_01396	PFAM:PF00137	PRINTS:PR00124	ScanProsite:PS00605	PANTHER:PTHR10031	PANTHER:PTHR10031:SF14
SUPFAM:SSF81333	TMHMM:TMhelix	UniParc:UPI0004EDC936	SEG:seg	:	:

Description

BnaC01g27050DBnaC01g27050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FX52]

Coordinates

chrLK032075:-:665595..666725

Molecular Weight (calculated)

14633.8 Da

IEP (calculated)

5.116

GRAVY (calculated)

0.397

Length

139 amino acids

Sequence
(BLAST)

001: MTKREENYQP EMLEGAKSIG AGAATIASAG AAIGIGNVFS SLIHSVARNP SLAKQSFGYA ILGFALTEAI ALFAPMMAFL ILLYSDRIKK VSFIIHLVSP
101: ALPLLEPIIW AAVGGGALPS TGPNGAERDT IREEDSFEL

Best Arabidopsis Sequence Match ( AT2G07671.1 )
(BLAST)

1: MTKREYNSQP EMLEGAKSIG AGAATIASAG AAIGIGNVFS SLIHSVARNP SLAKQSFGYA ILGFALTEAI ALFAPMMAFL ILFVF

Arabidopsis Description

ATP synthase subunit 9, mitochondrial [Source:UniProtKB/TrEMBL;Acc:Q304C3]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.