Factsheet for TraesCSU01G262500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
golgi 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
BAV58157	Barley	endoplasmic reticulum, vacuole	69.03	97.5
TraesCS1D01G196200.1	Wheat	golgi, mitochondrion, plasma membrane	97.35	97.35
BAC19885	Rice	endoplasmic reticulum, extracellular, vacuole	63.72	96.0
TraesCS6A01G202700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	66.37	93.75
TraesCS4D01G161000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	65.49	92.5
TraesCS2D01G247000.1	Wheat	endoplasmic reticulum, extracellular	64.6	91.25
VIT_00s0438g00020.t01	Wine grape	cytosol	56.64	86.49
PGSC0003DMT400005614	Potato	plastid	53.1	85.71
ATMG01080.1	Thale cress	cytosol, mitochondrion, plasma membrane	63.72	84.71
AT2G07671.1	Thale cress	cytosol, mitochondrion, plasma membrane	63.72	84.71
GSMUA_AchrUn_...	Banana	plastid	61.06	84.15
CDY45507	Canola	cytosol, nucleus, vacuole	62.83	83.53
CDY72393	Canola	cytosol, golgi, vacuole	60.18	80.0
VIT_12s0055g00090.t01	Wine grape	plastid	48.67	77.46
Os01t0899275-00	Rice	mitochondrion	37.17	51.85
CDY17581	Canola	cytosol, peroxisome, plastid	62.83	51.08
Os01t0899350-00	Rice	plastid	35.4	43.48

Protein Annotations

Gene3D:1.20.20.10	MapMan:2.4.6.1.3	InterPro:ATP_synth_F0_csu	InterPro:ATP_synth_F0_csu_DDCD_BS	InterPro:ATP_synth_F0_csu_sf	InterPro:ATPase_proteolipid_c-like_dom
InterPro:F/V-ATP_Csub_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015078	GO:GO:0015986	GO:GO:0015991	GO:GO:0016020	GO:GO:0033177	GO:GO:0045263
InterPro:IPR038662	HAMAP:MF_01396	PFAM:PF00137	PRINTS:PR00124	ScanProsite:PS00605	PANTHER:PTHR10031
PANTHER:PTHR10031:SF14	SUPFAM:SSF81333	TMHMM:TMhelix	EnsemblPlantsGene:TraesCSU01G262500	EnsemblPlants:TraesCSU01G262500.1	SEG:seg

Description

No Description!

Coordinates

chrUn:+:417899509..417899850

Molecular Weight (calculated)

12245.4 Da

IEP (calculated)

11.767

GRAVY (calculated)

0.348

Length

113 amino acids

Sequence
(BLAST)

001: MEVQAQVLRI IKKKSKKEQR RKNVTRKVFS RLEMLEGAKS IGAGAATIAL AGAVVGIGNV LSSLIHSVAR NPSLAKQSFG YAILGFALTE AIALFAPMMA
101: FLISFVFRLH KKS

Best Arabidopsis Sequence Match ( AT2G07671.1 )
(BLAST)

1: MTKREYNSQP EMLEGAKSIG AGAATIASAG AAIGIGNVFS SLIHSVARNP SLAKQSFGYA ILGFALTEAI ALFAPMMAFL ILFVF

Arabidopsis Description

ATP synthase subunit 9, mitochondrial [Source:UniProtKB/TrEMBL;Acc:Q304C3]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.