Factsheet for TraesCS6A01G202700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 1
extracellular 3
golgi 3
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
BAV58157	Barley	endoplasmic reticulum, vacuole	96.25	96.25
TraesCS6A01G109900.1	Wheat	extracellular	77.5	93.94
TraesCS6A01G161100.1	Wheat	endoplasmic reticulum, plastid, vacuole	93.75	93.75
BAC19885	Rice	endoplasmic reticulum, extracellular, vacuole	87.5	93.33
TraesCS6A01G208600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	86.25	93.24
TraesCS3A01G188800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	85.0	91.89
TraesCS2A01G536000.1	Wheat	endoplasmic reticulum, vacuole	91.25	91.25
TraesCS4D01G161000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	90.0	90.0
TraesCS2D01G247000.1	Wheat	endoplasmic reticulum, extracellular	90.0	90.0
TraesCS4A01G161300.1	Wheat	extracellular	88.75	88.75
VIT_00s0438g00020.t01	Wine grape	cytosol	77.5	83.78
GSMUA_AchrUn_...	Banana	plastid	85.0	82.93
PGSC0003DMT400005614	Potato	plastid	72.5	82.86
ATMG01080.1	Thale cress	cytosol, mitochondrion, plasma membrane	83.75	78.82
CDY45507	Canola	cytosol, nucleus, vacuole	83.75	78.82
AT2G07671.1	Thale cress	cytosol, mitochondrion, plasma membrane	83.75	78.82
CDY72393	Canola	cytosol, golgi, vacuole	80.0	75.29
VIT_12s0055g00090.t01	Wine grape	plastid	66.25	74.65
TraesCS1D01G196200.1	Wheat	golgi, mitochondrion, plasma membrane	96.25	68.14
TraesCS5A01G020000.1	Wheat	golgi, mitochondrion, vacuole	96.25	68.14
TraesCS7A01G098200.1	Wheat	mitochondrion, nucleus, plastid	95.0	67.26
TraesCS5A01G208000.1	Wheat	golgi, mitochondrion, plastid	93.75	66.37
TraesCSU01G262500.1	Wheat	plastid	93.75	66.37
Os01t0899275-00	Rice	mitochondrion	52.5	51.85
CDY17581	Canola	cytosol, peroxisome, plastid	83.75	48.2
Os01t0899350-00	Rice	plastid	51.25	44.57

Protein Annotations

Gene3D:1.20.20.10	MapMan:2.4.6.1.3	InterPro:ATP_synth_F0_csu	InterPro:ATP_synth_F0_csu_DDCD_BS	InterPro:ATP_synth_F0_csu_sf	InterPro:ATPase_proteolipid_c-like_dom
InterPro:F/V-ATP_Csub_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015078	GO:GO:0015986	GO:GO:0015991	GO:GO:0016020	GO:GO:0033177	GO:GO:0045263
InterPro:IPR038662	HAMAP:MF_01396	PFAM:PF00137	PRINTS:PR00124	ScanProsite:PS00605	PANTHER:PTHR10031
PANTHER:PTHR10031:SF14	SUPFAM:SSF81333	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G202700	EnsemblPlants:TraesCS6A01G202700.1	SEG:seg

Description

No Description!

Coordinates

chr6A:+:338517639..338517881

Molecular Weight (calculated)

8167.2 Da

IEP (calculated)

11.222

GRAVY (calculated)

0.934

Length

80 amino acids

Sequence
(BLAST)

1: MLEGAKSIGA GAATIALVGA AVGIGNVLSS LIHSVARNPS LAKQSFGHAI LGFALIEAIA LFAPMMAFLI SFVFRSHKKS

Best Arabidopsis Sequence Match ( ATMG00040.1 )
(BLAST)

001: MTKREYNSQP EMLEGAKSIG AGAATIASAG AAIGIGNVFS SLIHSVARNP SLATTTVLVV TLTLLGGVAA FYLHSFRLKG PLKKIIYLFL VFFIAVGISL
101: IRIKAIHLLG LALPLLVPPL VWNAIGGGGE ALPSTGPNGA SSYSEWFTYT SDLEDSASSG RTSSSVNQPI QREQAGPSNA LPEPAASPVA QQQDHLDQPF
201: GEGGEREARA QEHDRISAEV ETITSACENL EAAMVRKAHI LLHQRGVTLG DPEDVKRALQ LALHDDWEHD IDDRKRHFTV LRRDFGTARC ERWNPFIDEL
301: RGLGNRQVNA RHYVD

Arabidopsis Description

ORF315Uncharacterized ATP synthase C chain-like protein [Source:UniProtKB/Swiss-Prot;Acc:P93278]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.