CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, vacuole
Any Predictor:	cytosol, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
ATMG01080.1	Thale cress	cytosol, mitochondrion, plasma membrane	97.65	97.65
CDY72393	Canola	cytosol, golgi, vacuole	96.47	96.47
TraesCS6A01G109900.1	Wheat	extracellular	71.76	92.42
TraesCS6A01G208600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	80.0	91.89
BAC19885	Rice	endoplasmic reticulum, extracellular, vacuole	80.0	90.67
VIT_00s0438g00020.t01	Wine grape	cytosol	78.82	90.54
TraesCS3A01G188800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	78.82	90.54
BAV58157	Barley	endoplasmic reticulum, vacuole	82.35	87.5
PGSC0003DMT400005614	Potato	plastid	71.76	87.14
TraesCS4D01G137900.1	Wheat	endoplasmic reticulum, extracellular	81.18	86.25
TraesCS1B01G353100.1	Wheat	endoplasmic reticulum, extracellular	80.0	85.0
TraesCS7B01G033600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	80.0	85.0
TraesCS4D01G139700.1	Wheat	golgi, plastid, vacuole	80.0	85.0
TraesCS6A01G161100.1	Wheat	endoplasmic reticulum, plastid, vacuole	80.0	85.0
TraesCS5D01G079400.1	Wheat	endoplasmic reticulum, extracellular, plastid	71.76	84.72
TraesCS3D01G226700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	78.82	83.75
TraesCS5D01G197900.1	Wheat	extracellular	78.82	83.75
TraesCS4D01G146000.1	Wheat	extracellular	78.82	83.75
TraesCS3B01G364200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	78.82	83.75
TraesCS6A01G202700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	78.82	83.75
TraesCS2A01G536000.1	Wheat	endoplasmic reticulum, vacuole	78.82	83.75
TraesCS4A01G161300.1	Wheat	extracellular	77.65	82.5
TraesCS6B01G232800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	77.65	82.5
VIT_12s0055g00090.t01	Wine grape	plastid	68.24	81.69
TraesCS2D01G247000.1	Wheat	endoplasmic reticulum, extracellular	76.47	81.25
GSMUA_AchrUn_...	Banana	plastid	77.65	80.49
TraesCS7B01G120100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	75.29	80.0
TraesCS4D01G161000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	75.29	80.0
TraesCS4D01G279600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	75.29	80.0
TraesCS4B01G146900.1	Wheat	endoplasmic reticulum, mitochondrion, vacuole	82.35	65.42
TraesCS5A01G020000.1	Wheat	golgi, mitochondrion, vacuole	84.71	63.72
TraesCS7B01G456900.1	Wheat	golgi, mitochondrion, nucleus	84.71	63.72
TraesCS7A01G098200.1	Wheat	mitochondrion, nucleus, plastid	83.53	62.83
TraesCSU01G262500.1	Wheat	plastid	83.53	62.83
TraesCS5A01G208000.1	Wheat	golgi, mitochondrion, plastid	82.35	61.95
HORVU7Hr1G089590.1	Barley	golgi, mitochondrion, plasma membrane	82.35	61.95
TraesCS6B01G233000.1	Wheat	golgi, mitochondrion, plasma membrane	82.35	61.95
TraesCS6D01G261900.1	Wheat	golgi, mitochondrion, plasma membrane	82.35	61.95
TraesCS1D01G196200.1	Wheat	golgi, mitochondrion, plasma membrane	82.35	61.95
TraesCS2D01G247900.1	Wheat	golgi, mitochondrion, plastid	81.18	61.06
TraesCS6D01G261700.1	Wheat	mitochondrion	80.0	60.18
TraesCS2B01G265300.1	Wheat	mitochondrion	80.0	60.18
TraesCS2B01G264900.1	Wheat	golgi, mitochondrion, plastid	80.0	60.18
TraesCS1D01G193500.1	Wheat	mitochondrion	80.0	60.18
CDY17581	Canola	cytosol, peroxisome, plastid	96.47	58.99
TraesCS3B01G301200.1	Wheat	mitochondrion	77.65	58.41
Os01t0899275-00	Rice	mitochondrion	47.06	49.38
Os01t0899350-00	Rice	plastid	44.71	41.3

Protein Annotations

Gene3D:1.20.20.10	MapMan:2.4.6.1.3	GO:A0A078I5Y5	UniProt:A0A078I5Y5	InterPro:ATP_synth_F0_csu	InterPro:ATP_synth_F0_csu_DDCD_BS
InterPro:ATP_synth_F0_csu_sf	InterPro:ATPase_proteolipid_c-like_dom	EnsemblPlants:CDY45507	ProteinID:CDY45507	ProteinID:CDY45507.1	InterPro:F/V-ATP_Csub_sf
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289
GO:GO:0009058	GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0015991	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0033177	GO:GO:0045263	EnsemblPlantsGene:GSBRNA2T00082183001	InterPro:IPR038662
HAMAP:MF_01396	PFAM:PF00137	PRINTS:PR00124	ScanProsite:PS00605	PANTHER:PTHR10031	PANTHER:PTHR10031:SF14
SUPFAM:SSF81333	TMHMM:TMhelix	UniParc:UPI0000175EBB	SEG:seg	:	:

Description

BnaCnng12660DBnaCnng12660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5Y5]

Coordinates

chrLK032627:-:94247..94648

Molecular Weight (calculated)

8883.9 Da

IEP (calculated)

7.535

GRAVY (calculated)

0.680

Length

85 amino acids

Sequence
(BLAST)

1: MTKREENYQP EMLEGAKSIG AGAATIASAG AAIGIGNVFS SLIHSVARNP SLAKQSFGYA ILGFALTEAI ALFAPMMAFL ILFVF

Best Arabidopsis Sequence Match ( AT2G07671.1 )
(BLAST)

1: MTKREYNSQP EMLEGAKSIG AGAATIASAG AAIGIGNVFS SLIHSVARNP SLAKQSFGYA ILGFALTEAI ALFAPMMAFL ILFVF

Arabidopsis Description

ATP synthase subunit 9, mitochondrial [Source:UniProtKB/TrEMBL;Acc:Q304C3]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.