Factsheet for VIT_12s0055g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005614	Potato	plastid	81.69	82.86
VIT_00s0438g00020.t01	Wine grape	cytosol	84.51	81.08
TraesCS6A01G208600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	76.06	72.97
TraesCS6A01G109900.1	Wheat	extracellular	67.61	72.73
BAC19885	Rice	endoplasmic reticulum, extracellular, vacuole	76.06	72.0
TraesCS3A01G188800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	74.65	71.62
BAV58157	Barley	endoplasmic reticulum, vacuole	78.87	70.0
TraesCS6A01G161100.1	Wheat	endoplasmic reticulum, plastid, vacuole	78.87	70.0
TraesCS4D01G139700.1	Wheat	golgi, plastid, vacuole	77.46	68.75
TraesCS4D01G137900.1	Wheat	endoplasmic reticulum, extracellular	77.46	68.75
TraesCS1B01G353100.1	Wheat	endoplasmic reticulum, extracellular	77.46	68.75
ATMG01080.1	Thale cress	cytosol, mitochondrion, plasma membrane	81.69	68.24
AT2G07671.1	Thale cress	cytosol, mitochondrion, plasma membrane	81.69	68.24
CDY45507	Canola	cytosol, nucleus, vacuole	81.69	68.24
TraesCS5D01G079400.1	Wheat	endoplasmic reticulum, extracellular, plastid	69.01	68.06
TraesCS7B01G033600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	76.06	67.5
TraesCS6B01G232800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	76.06	67.5
TraesCS4D01G146000.1	Wheat	extracellular	76.06	67.5
CDY72393	Canola	cytosol, golgi, vacuole	80.28	67.06
TraesCS2A01G536000.1	Wheat	endoplasmic reticulum, vacuole	74.65	66.25
TraesCS6A01G202700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	74.65	66.25
TraesCS5D01G197900.1	Wheat	extracellular	74.65	66.25
TraesCS3B01G364200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	74.65	66.25
TraesCS3D01G226700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	74.65	66.25
TraesCS4A01G161300.1	Wheat	extracellular	74.65	66.25
GSMUA_AchrUn_...	Banana	plastid	76.06	65.85
TraesCS4D01G279600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	73.24	65.0
TraesCS2D01G247000.1	Wheat	endoplasmic reticulum, extracellular	73.24	65.0
TraesCS7B01G120100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	71.83	63.75
TraesCS4D01G161000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.42	62.5
TraesCS4B01G146900.1	Wheat	endoplasmic reticulum, mitochondrion, vacuole	76.06	50.47
TraesCS5A01G020000.1	Wheat	golgi, mitochondrion, vacuole	78.87	49.56
TraesCS7B01G456900.1	Wheat	golgi, mitochondrion, nucleus	78.87	49.56
TraesCS7A01G098200.1	Wheat	mitochondrion, nucleus, plastid	77.46	48.67
TraesCS2B01G265300.1	Wheat	mitochondrion	77.46	48.67
TraesCSU01G262500.1	Wheat	plastid	77.46	48.67
TraesCS5A01G208000.1	Wheat	golgi, mitochondrion, plastid	77.46	48.67
TraesCS2D01G247900.1	Wheat	golgi, mitochondrion, plastid	76.06	47.79
HORVU7Hr1G089590.1	Barley	golgi, mitochondrion, plasma membrane	76.06	47.79
TraesCS1D01G196200.1	Wheat	golgi, mitochondrion, plasma membrane	76.06	47.79
TraesCS6B01G233000.1	Wheat	golgi, mitochondrion, plasma membrane	76.06	47.79
TraesCS6D01G261700.1	Wheat	mitochondrion	76.06	47.79
TraesCS6D01G261900.1	Wheat	golgi, mitochondrion, plasma membrane	76.06	47.79
TraesCS1D01G193500.1	Wheat	mitochondrion	74.65	46.9
TraesCS2B01G264900.1	Wheat	golgi, mitochondrion, plastid	74.65	46.9
TraesCS3B01G301200.1	Wheat	mitochondrion	73.24	46.02
Os01t0899275-00	Rice	mitochondrion	47.89	41.98
CDY17581	Canola	cytosol, peroxisome, plastid	81.69	41.73
Os01t0899350-00	Rice	plastid	45.07	34.78

Protein Annotations

Gene3D:1.20.20.10	MapMan:2.4.6.1.3	InterPro:ATP_synth_F0_csu	InterPro:ATP_synth_F0_csu_DDCD_BS	InterPro:ATP_synth_F0_csu_sf	InterPro:ATPase_proteolipid_c-like_dom
ProteinID:CCB46121	ProteinID:CCB46121.1	InterPro:F/V-ATP_Csub_sf	UniProt:F6H1Q2	EMBL:FN595228	GO:GO:0000276
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006810	GO:GO:0006811
GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987	GO:GO:0015078
GO:GO:0015986	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0033177	GO:GO:0045263	GO:GO:0046933	InterPro:IPR038662	PFAM:PF00137	PRINTS:PR00124
ScanProsite:PS00605	PANTHER:PTHR10031	PANTHER:PTHR10031:SF14	SUPFAM:SSF81333	TMHMM:TMhelix	UniParc:UPI000210AC9F
ArrayExpress:VIT_12s0055g00090	EnsemblPlantsGene:VIT_12s0055g00090	EnsemblPlants:VIT_12s0055g00090.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:-:12663578..12664943

Molecular Weight (calculated)

7284.9 Da

IEP (calculated)

10.240

GRAVY (calculated)

0.752

Length

71 amino acids

Sequence
(BLAST)

1: MGAGATTIAS AGAAISIGNV FSSLIHFVAR NPSLAKQSFG YAILGFALTE AIASFAPMMA FLISSKRDPF T

Best Arabidopsis Sequence Match ( AT2G07671.1 )
(BLAST)

1: MTKREYNSQP EMLEGAKSIG AGAATIASAG AAIGIGNVFS SLIHSVARNP SLAKQSFGYA ILGFALTEAI ALFAPMMAFL ILFVF

Arabidopsis Description

ATP synthase subunit 9, mitochondrial [Source:UniProtKB/TrEMBL;Acc:Q304C3]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.