CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, vacuole
Any Predictor:	cytosol, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	golgi
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45507	Canola	cytosol, nucleus, vacuole	96.47	96.47
AT2G07671.1	Thale cress	cytosol, mitochondrion, plasma membrane	94.12	94.12
TraesCS6A01G109900.1	Wheat	extracellular	70.59	90.91
TraesCS3A01G188800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	77.65	89.19
VIT_00s0438g00020.t01	Wine grape	cytosol	76.47	87.84
TraesCS6A01G208600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	76.47	87.84
BAC19885	Rice	endoplasmic reticulum, extracellular, vacuole	76.47	86.67
BAV58157	Barley	endoplasmic reticulum, vacuole	78.82	83.75
TraesCS7B01G033600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	78.82	83.75
TraesCS6A01G161100.1	Wheat	endoplasmic reticulum, plastid, vacuole	78.82	83.75
PGSC0003DMT400005614	Potato	plastid	68.24	82.86
TraesCS4D01G137900.1	Wheat	endoplasmic reticulum, extracellular	77.65	82.5
TraesCS3D01G226700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	77.65	82.5
TraesCS3B01G364200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	77.65	82.5
TraesCS1B01G353100.1	Wheat	endoplasmic reticulum, extracellular	77.65	82.5
TraesCS5D01G079400.1	Wheat	endoplasmic reticulum, extracellular, plastid	69.41	81.94
TraesCS6B01G232800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	76.47	81.25
TraesCS4D01G139700.1	Wheat	golgi, plastid, vacuole	76.47	81.25
VIT_12s0055g00090.t01	Wine grape	plastid	67.06	80.28
TraesCS6A01G202700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	75.29	80.0
TraesCS5D01G197900.1	Wheat	extracellular	75.29	80.0
TraesCS2A01G536000.1	Wheat	endoplasmic reticulum, vacuole	75.29	80.0
TraesCS4D01G146000.1	Wheat	extracellular	75.29	80.0
TraesCS7B01G120100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	74.12	78.75
TraesCS4A01G161300.1	Wheat	extracellular	74.12	78.75
TraesCS2D01G247000.1	Wheat	endoplasmic reticulum, extracellular	72.94	77.5
GSMUA_AchrUn_...	Banana	plastid	74.12	76.83
TraesCS4D01G279600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	71.76	76.25
TraesCS4D01G161000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	71.76	76.25
TraesCS4B01G146900.1	Wheat	endoplasmic reticulum, mitochondrion, vacuole	78.82	62.62
TraesCS5A01G020000.1	Wheat	golgi, mitochondrion, vacuole	81.18	61.06
TraesCS7B01G456900.1	Wheat	golgi, mitochondrion, nucleus	81.18	61.06
TraesCS6D01G261900.1	Wheat	golgi, mitochondrion, plasma membrane	81.18	61.06
TraesCS2D01G247900.1	Wheat	golgi, mitochondrion, plastid	80.0	60.18
TraesCSU01G262500.1	Wheat	plastid	80.0	60.18
TraesCS7A01G098200.1	Wheat	mitochondrion, nucleus, plastid	80.0	60.18
TraesCS5A01G208000.1	Wheat	golgi, mitochondrion, plastid	78.82	59.29
TraesCS6B01G233000.1	Wheat	golgi, mitochondrion, plasma membrane	78.82	59.29
HORVU7Hr1G089590.1	Barley	golgi, mitochondrion, plasma membrane	78.82	59.29
TraesCS1D01G196200.1	Wheat	golgi, mitochondrion, plasma membrane	78.82	59.29
TraesCS2B01G264900.1	Wheat	golgi, mitochondrion, plastid	76.47	57.52
TraesCS3B01G301200.1	Wheat	mitochondrion	76.47	57.52
TraesCS6D01G261700.1	Wheat	mitochondrion	76.47	57.52
TraesCS2B01G265300.1	Wheat	mitochondrion	76.47	57.52
TraesCS1D01G193500.1	Wheat	mitochondrion	76.47	57.52
CDY17581	Canola	cytosol, peroxisome, plastid	92.94	56.83
Os01t0899275-00	Rice	mitochondrion	45.88	48.15
Os01t0899350-00	Rice	plastid	43.53	40.22

Protein Annotations

Gene3D:1.20.20.10	MapMan:2.4.6.1.3	GO:A0A078JXN8	UniProt:A0A078JXN8	InterPro:ATP_synth_F0_csu	InterPro:ATP_synth_F0_csu_DDCD_BS
InterPro:ATP_synth_F0_csu_sf	InterPro:ATPase_proteolipid_c-like_dom	EnsemblPlants:CDY72393	ProteinID:CDY72393	ProteinID:CDY72393.1	InterPro:F/V-ATP_Csub_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005753	GO:GO:0006139
GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058
GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0031966	GO:GO:0033177	GO:GO:0045263	EnsemblPlantsGene:GSBRNA2T00028331001	InterPro:IPR038662
HAMAP:MF_01396	PFAM:PF00137	PRINTS:PR00124	ScanProsite:PS00605	PANTHER:PTHR10031	PANTHER:PTHR10031:SF14
SUPFAM:SSF81333	TMHMM:TMhelix	UniParc:UPI0004EEBC55	SEG:seg	:	:

Description

BnaAnng40960DBnaAnng40960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXN8]

Coordinates

chrLK050754:+:368..770

Molecular Weight (calculated)

8924.0 Da

IEP (calculated)

7.535

GRAVY (calculated)

0.734

Length

85 amino acids

Sequence
(BLAST)

1: MTKREENYQP EMLEGAKSIG VGAATIASAG AAISIGNVFS SLIHSVARNP SLAKQSFGYA ILGFALTEAI ALFAPIMAFL ILFVF

Best Arabidopsis Sequence Match ( AT2G07671.1 )
(BLAST)

1: MTKREYNSQP EMLEGAKSIG AGAATIASAG AAIGIGNVFS SLIHSVARNP SLAKQSFGYA ILGFALTEAI ALFAPMMAFL ILFVF

Arabidopsis Description

ATP synthase subunit 9, mitochondrial [Source:UniProtKB/TrEMBL;Acc:Q304C3]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.