Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G537400.1 | Wheat | extracellular | 84.0 | 84.85 |
| HORVU2Hr1G108660.1 | Barley | extracellular | 56.0 | 59.57 |
| EES13181 | Sorghum | extracellular | 42.0 | 47.19 |
| TraesCS1D01G164000.1 | Wheat | extracellular | 43.0 | 45.26 |
| EES08427 | Sorghum | endoplasmic reticulum, extracellular | 41.0 | 45.05 |
| OQU75578 | Sorghum | endoplasmic reticulum, extracellular | 41.0 | 45.05 |
| OQU83333 | Sorghum | endoplasmic reticulum, extracellular | 41.0 | 45.05 |
| Zm00001d052759_P001 | Maize | extracellular | 43.0 | 44.33 |
| OQU75598 | Sorghum | extracellular | 40.0 | 43.96 |
| OQU83334 | Sorghum | extracellular | 40.0 | 43.96 |
| TraesCS4A01G424000.1 | Wheat | extracellular | 38.0 | 42.7 |
| TraesCS4A01G424100.1 | Wheat | extracellular | 38.0 | 42.7 |
| TraesCS4A01G424200.1 | Wheat | extracellular | 38.0 | 42.7 |
| TraesCS3D01G023400.1 | Wheat | plastid | 33.0 | 39.29 |
| KRH01717 | Soybean | extracellular | 35.0 | 36.84 |
| KRH70406 | Soybean | extracellular | 35.0 | 36.84 |
| TraesCS1D01G163900.1 | Wheat | unclear | 33.0 | 36.26 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 29.0 | 35.8 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 30.0 | 32.61 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 30.0 | 32.61 |
| TraesCS1D01G381300.1 | Wheat | extracellular | 31.0 | 31.63 |
| KRH33571 | Soybean | extracellular | 31.0 | 31.0 |
| KRG93187 | Soybean | extracellular | 30.0 | 30.93 |
| TraesCS1D01G381600.1 | Wheat | extracellular | 30.0 | 30.61 |
| TraesCS1D01G381200.1 | Wheat | extracellular | 30.0 | 30.61 |
| Solyc03g034390.1.1 | Tomato | extracellular | 29.0 | 30.53 |
| KRH39147 | Soybean | extracellular | 28.0 | 30.11 |
| KRH56524 | Soybean | extracellular | 30.0 | 30.0 |
| TraesCS3D01G261600.1 | Wheat | extracellular | 28.0 | 29.47 |
| TraesCS1D01G381100.1 | Wheat | extracellular | 28.0 | 29.17 |
| KRH48557 | Soybean | extracellular | 27.0 | 29.03 |
| PGSC0003DMT400056046 | Potato | extracellular | 29.0 | 29.0 |
| TraesCS1D01G380800.1 | Wheat | extracellular | 27.0 | 28.12 |
| TraesCS7D01G406300.1 | Wheat | endoplasmic reticulum | 29.0 | 21.01 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G510800.1 | EnsemblPlantsGene:TraesCS2D01G510800 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF10 | PFAM:PF14368 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr2D:-:602635785..602636087
Molecular Weight (calculated)
10787.2 Da
IEP (calculated)
7.966
GRAVY (calculated)
0.058
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MARTTAVSVW ALVIAVVVAG AMATDPRCPP KKLLPCNPEV KEGKEEPSAL CCSNLRAQEG CLCLYLHDPS YQRYFGGAEP RKTITSCGIP IPYCLSTTNI
1: MVMIKTTMVS LFALAAVLLM ILAPAAEAVT CSPMQLSPCA TAITSSSPPS ALCCAKLKEQ RPCLCGYMRN PSLRRFVSTP NARKVSKSCK LPIPRC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.