Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13181 | Sorghum | extracellular | 51.55 | 56.18 |
| EES08427 | Sorghum | endoplasmic reticulum, extracellular | 50.52 | 53.85 |
| OQU83333 | Sorghum | endoplasmic reticulum, extracellular | 50.52 | 53.85 |
| OQU75578 | Sorghum | endoplasmic reticulum, extracellular | 50.52 | 53.85 |
| OQU83334 | Sorghum | extracellular | 48.45 | 51.65 |
| OQU75598 | Sorghum | extracellular | 48.45 | 51.65 |
| Zm00001d013907_P001 | Maize | plastid | 46.39 | 46.88 |
| TraesCS2D01G510800.1 | Wheat | extracellular | 44.33 | 43.0 |
| TraesCS2B01G537400.1 | Wheat | extracellular | 43.3 | 42.42 |
| Zm00001d027332_P001 | Maize | extracellular | 42.27 | 41.84 |
| TraesCS4A01G424200.1 | Wheat | extracellular | 38.14 | 41.57 |
| TraesCS4A01G424000.1 | Wheat | extracellular | 38.14 | 41.57 |
| KRH70406 | Soybean | extracellular | 40.21 | 41.05 |
| KRH01717 | Soybean | extracellular | 40.21 | 41.05 |
| TraesCS4A01G424100.1 | Wheat | extracellular | 37.11 | 40.45 |
| HORVU2Hr1G108660.1 | Barley | extracellular | 39.18 | 40.43 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 29.9 | 35.8 |
| Zm00001d038913_P001 | Maize | endoplasmic reticulum, extracellular | 36.08 | 35.71 |
| Zm00001d007299_P001 | Maize | extracellular | 36.08 | 35.35 |
| Zm00001d036452_P001 | Maize | extracellular | 34.02 | 35.11 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 32.99 | 34.78 |
| Zm00001d037677_P001 | Maize | endoplasmic reticulum, plasma membrane | 36.08 | 34.65 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 31.96 | 33.7 |
| Zm00001d038911_P001 | Maize | extracellular | 35.05 | 33.66 |
| Solyc03g034390.1.1 | Tomato | extracellular | 30.93 | 31.58 |
| KRH39147 | Soybean | extracellular | 28.87 | 30.11 |
| KRH48557 | Soybean | extracellular | 27.84 | 29.03 |
| PGSC0003DMT400056046 | Potato | extracellular | 29.9 | 29.0 |
| KRH56524 | Soybean | extracellular | 29.9 | 29.0 |
| KRG93187 | Soybean | extracellular | 28.87 | 28.87 |
| KRH33571 | Soybean | extracellular | 28.87 | 28.0 |
Protein Annotations
| EMBL:EU951819 | EnsemblPlants:Zm00001d052759_P001 | EnsemblPlants:Zm00001d052759_T001 | EnsemblPlantsGene:Zm00001d052759 | EntrezGene:100280457 | Gene3D:1.10.110.10 |
| GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 |
| PANTHER:PTHR33214 | PANTHER:PTHR33214:SF10 | PFAM:PF14368 | ProteinID:AQK58016.1 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF47699 | TMHMM:TMhelix | UniParc:UPI000182B13B | UniProt:B6SGF4 | MapMan:35.2 | : |
Description
Nonspecific lipid-transfer protein
Coordinates
chr4:+:199958327..199958620
Molecular Weight (calculated)
9895.2 Da
IEP (calculated)
8.587
GRAVY (calculated)
0.435
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKSTAMFVA ALALVVVMAT TSTGGGRAAA ACDPKPLVVC DPAFMDGAKP AAACCSTLRA QEACLCVYAK DPKFAKYINN PNTAKTFTSC GIAIPKC
001: MKFTKLLFVA SVMIVMSPLA PTRATVVGGW GIEEKAACIV TNLMSCLPAI LKGSQPPAYC CEMLKEQQSC LCGYIKSPTF GHYVIPQNAH KLLAACGILY
101: PKC
101: PKC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M2L6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.