Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0620300-01 | Rice | extracellular | 63.64 | 57.27 |
| Zm00001d036452_P001 | Maize | extracellular | 39.39 | 41.49 |
| Zm00001d013907_P001 | Maize | plastid | 37.37 | 38.54 |
| Zm00001d038911_P001 | Maize | extracellular | 37.37 | 36.63 |
| Zm00001d037677_P001 | Maize | endoplasmic reticulum, plasma membrane | 37.37 | 36.63 |
| Zm00001d052759_P001 | Maize | extracellular | 35.35 | 36.08 |
| Zm00001d038913_P001 | Maize | endoplasmic reticulum, extracellular | 35.35 | 35.71 |
| Zm00001d027332_P001 | Maize | extracellular | 35.35 | 35.71 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 28.28 | 34.57 |
| KRH70406 | Soybean | extracellular | 32.32 | 33.68 |
| KRH01717 | Soybean | extracellular | 32.32 | 33.68 |
| Solyc03g034390.1.1 | Tomato | extracellular | 31.31 | 32.63 |
| KRH48557 | Soybean | extracellular | 29.29 | 31.18 |
| PGSC0003DMT400056046 | Potato | extracellular | 30.3 | 30.0 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 27.27 | 29.35 |
| KRH39147 | Soybean | extracellular | 27.27 | 29.03 |
| KRH33571 | Soybean | extracellular | 28.28 | 28.0 |
| KRG93187 | Soybean | extracellular | 27.27 | 27.84 |
| KRH56524 | Soybean | extracellular | 27.27 | 27.0 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 24.24 | 26.09 |
Protein Annotations
| Gene3D:1.10.110.10 | EntrezGene:103647985 | MapMan:35.1 | UniProt:A0A1D6F5A7 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| GO:GO:0008289 | ProteinID:ONM26478.1 | PFAM:PF00234 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF10 | SMART:SM00499 |
| SUPFAM:SSF47699 | SignalP:SignalP-noTM | UniParc:UPI0002219481 | EnsemblPlantsGene:Zm00001d007299 | EnsemblPlants:Zm00001d007299_P001 | EnsemblPlants:Zm00001d007299_T001 |
| InterPro:nsLTP2 | SEG:seg | : | : | : | : |
Description
Probable non-specific lipid-transfer protein 2
Coordinates
chr2:-:227230998..227231495
Molecular Weight (calculated)
10303.6 Da
IEP (calculated)
8.774
GRAVY (calculated)
0.248
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MTTTTTTLPT GRAVALLLLL LATTATEAAN PCNPAQLTPC AGPALFGGAV PPACCAQLRA QQGCLCGYAR SPNYGSYIRS PNAARLFAIC NLPMPRCRY
1: MKGSCTKPVF FTCTILLILI VAQENRVAAV DPCNPAQLSP CLETIMKGSE PSDLCCSKVK EQQHCICQYL KNPNFKSFLN SPNAKIIATD CHCPYPKC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9T4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.