Factsheet for Zm00001d038911_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18625	Sorghum	extracellular	84.16	87.63
Zm00001d037677_P001	Maize	endoplasmic reticulum, plasma membrane	87.13	87.13
HORVU0Hr1G001480.2	Barley	cytosol	34.65	72.92
TraesCS1A01G374200.1	Wheat	extracellular	65.35	68.75
Os05t0550300-01	Rice	extracellular	62.38	67.02
HORVU1Hr1G083160.1	Barley	extracellular	63.37	66.67
TraesCS1D01G380800.1	Wheat	extracellular	63.37	66.67
TraesCS1B01G394100.1	Wheat	extracellular	63.37	66.67
HORVU1Hr1G083170.1	Barley	extracellular	62.38	65.62
TraesCS1B01G394400.1	Wheat	extracellular	61.39	64.58
TraesCS1D01G381100.1	Wheat	extracellular	60.4	63.54
TraesCS1B01G394500.1	Wheat	extracellular	60.4	63.54
TraesCS1A01G374300.1	Wheat	extracellular	60.4	63.54
VIT_14s0006g02530.t01	Wine grape	plastid	38.61	48.15
Zm00001d038913_P001	Maize	endoplasmic reticulum, extracellular	44.55	45.92
GSMUA_Achr2P06400_001	Banana	extracellular	39.6	43.96
Zm00001d013907_P001	Maize	plastid	41.58	43.75
VIT_17s0000g03280.t01	Wine grape	extracellular	37.62	41.3
CDY52889	Canola	extracellular	38.61	40.62
GSMUA_Achr9P18720_001	Banana	extracellular	35.64	39.56
Bra040627.1-P	Field mustard	extracellular	36.63	38.95
CDY50600	Canola	extracellular	37.62	38.78
KRH33571	Soybean	extracellular	37.62	38.0
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	40.59	37.96
Zm00001d027332_P001	Maize	extracellular	36.63	37.76
CDY12591	Canola	extracellular	36.63	37.76
KRH48557	Soybean	extracellular	34.65	37.63
Zm00001d007299_P001	Maize	extracellular	36.63	37.37
AT1G66850.1	Thale cress	extracellular	37.62	37.25
KRG93187	Soybean	extracellular	35.64	37.11
AT5G38170.1	Thale cress	extracellular	37.62	36.89
KRH01717	Soybean	extracellular	34.65	36.84
VIT_14s0006g02550.t01	Wine grape	extracellular	32.67	35.87
KRH70406	Soybean	extracellular	33.66	35.79
KRH39147	Soybean	extracellular	32.67	35.48
Bra028162.1-P	Field mustard	extracellular	35.64	35.29
Zm00001d052759_P001	Maize	extracellular	33.66	35.05
KRH56524	Soybean	extracellular	33.66	34.0
AT5G38160.1	Thale cress	extracellular	33.66	33.01
Zm00001d036452_P001	Maize	extracellular	30.69	32.98
AT1G07747.1	Thale cress	extracellular	30.69	32.63
AT1G43666.1	Thale cress	extracellular	30.69	32.29
AT3G57310.1	Thale cress	extracellular	31.68	31.07
Bra033084.1-P	Field mustard	extracellular	30.69	31.0
CDY12874	Canola	extracellular	29.7	30.93
CDY40472	Canola	extracellular	29.7	30.93
CDY15628	Canola	extracellular	29.7	30.93
Bra027114.1-P	Field mustard	extracellular	29.7	30.93
Bra030699.1-P	Field mustard	extracellular	29.7	30.93
AT5G38195.1	Thale cress	extracellular	28.71	30.53
CDX95131	Canola	extracellular	29.7	30.3
CDX93626	Canola	extracellular	29.7	30.3
CDY61300	Canola	extracellular	28.71	29.9
CDY61301	Canola	extracellular	30.69	29.52
CDY70822	Canola	extracellular	29.7	29.41
AT2G14846.1	Thale cress	extracellular	28.71	29.29
Bra008375.1-P	Field mustard	extracellular	27.72	28.87
CDY26874	Canola	extracellular	27.72	28.87
CDY15627	Canola	extracellular	29.7	28.57
AT4G12825.1	Thale cress	extracellular	26.73	28.42
CDX93624	Canola	extracellular	27.72	28.28
Bra018687.1-P	Field mustard	extracellular	27.72	28.28
CDX95132	Canola	extracellular	27.72	28.28
CDY04056	Canola	extracellular	26.73	26.73
CDY01688	Canola	plastid	34.65	26.52
AT5G38180.1	Thale cress	extracellular	24.75	26.32
AT1G43667.1	Thale cress	extracellular	24.75	25.51
AT5G38197.1	Thale cress	extracellular	21.78	22.92
AT1G43665.1	Thale cress	extracellular	26.73	21.95
CDY44406	Canola	extracellular	31.68	17.3
Bra033087.1-P	Field mustard	extracellular	31.68	15.69

Protein Annotations

Gene3D:1.10.110.10	EntrezGene:100284199	MapMan:35.2	ProteinID:AQK88218.1	UniProt:B4FV12	EMBL:BT040950
EMBL:BT043288	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	EMBL:EU967473	GO:GO:0006810	GO:GO:0006869
GO:GO:0008150	PFAM:PF14368	PANTHER:PTHR33214	PANTHER:PTHR33214:SF5	SMART:SM00499	SUPFAM:SSF47699
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00017B7876	EnsemblPlantsGene:Zm00001d038911	EnsemblPlants:Zm00001d038911_P001	EnsemblPlants:Zm00001d038911_T001
InterPro:nsLTP2	SEG:seg	:	:	:	:

Description

Non-specific lipid-transfer protein 2

Coordinates

chr6:+:166851524..166851829

Molecular Weight (calculated)

10274.6 Da

IEP (calculated)

8.498

GRAVY (calculated)

0.350

Length

101 amino acids

Sequence
(BLAST)

001: MAKPSQVLVS ALAAWAVVLL LLCAAAPRGA DAATACDAAQ LTPCAGAIIG SSPPTAACCS RLREQQPCLC TYARDPKLQR YVSSPNGKNA MAACKVPVPS
101: C

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.