CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12874	Canola	extracellular	62.63	63.92
CDY40472	Canola	extracellular	62.63	63.92
CDX95131	Canola	extracellular	63.64	63.64
CDX93626	Canola	extracellular	62.63	62.63
CDY15628	Canola	extracellular	58.59	59.79
CDY61300	Canola	extracellular	57.58	58.76
CDY61301	Canola	extracellular	59.6	56.19
CDY15627	Canola	extracellular	58.59	55.24
CDY26874	Canola	extracellular	51.52	52.58
CDX95132	Canola	extracellular	52.53	52.53
AT3G57310.1	Thale cress	extracellular	50.51	48.54
AT2G14846.1	Thale cress	extracellular	46.46	46.46
AT1G07747.1	Thale cress	extracellular	42.42	44.21
CDY52889	Canola	extracellular	42.42	43.75
CDY50600	Canola	extracellular	42.42	42.86
CDY12591	Canola	extracellular	42.42	42.86
HORVU0Hr1G001480.2	Barley	cytosol	20.2	41.67
AT4G12825.1	Thale cress	extracellular	39.39	41.05
CDX92224	Canola	extracellular	37.37	38.54
CDY16462	Canola	extracellular	37.37	38.14
CDX77289	Canola	extracellular	37.37	38.14
AT1G43667.1	Thale cress	extracellular	37.37	37.76
CDY24453	Canola	extracellular	36.36	37.5
AT1G43666.1	Thale cress	extracellular	36.36	37.5
GSMUA_Achr2P06400_001	Banana	extracellular	34.34	37.36
CDY40833	Canola	extracellular	36.36	37.11
CDY68337	Canola	extracellular	36.36	37.11
CDY32103	Canola	extracellular	36.36	37.11
CDY04317	Canola	extracellular	36.36	37.11
TraesCS1D01G381200.1	Wheat	extracellular	36.36	36.73
CDY48021	Canola	endoplasmic reticulum, extracellular, plasma membrane	35.35	36.46
CDX75963	Canola	extracellular	35.35	36.46
CDY51937	Canola	extracellular	35.35	36.46
CDX95546	Canola	endoplasmic reticulum, extracellular, plasma membrane	35.35	36.46
TraesCS1B01G394700.1	Wheat	extracellular	35.35	36.08
TraesCS1D01G381300.1	Wheat	extracellular	35.35	35.71
Os05t0550600-02	Rice	extracellular	34.34	35.42
CDY01688	Canola	plastid	46.46	34.85
TraesCS3D01G261600.1	Wheat	extracellular	33.33	34.74
GSMUA_Achr9P18720_001	Banana	extracellular	31.31	34.07
CDY60143	Canola	extracellular	33.33	34.02
TraesCS3A01G261600.1	Wheat	extracellular	32.32	33.68
TraesCS1D01G381600.1	Wheat	extracellular	33.33	33.67
CDY45874	Canola	extracellular	33.33	33.67
CDY47738	Canola	extracellular	33.33	33.67
TraesCS1A01G374500.1	Wheat	extracellular	32.32	32.99
EES18626	Sorghum	extracellular	34.34	32.69
TraesCS1A01G374400.1	Wheat	extracellular	32.32	32.65
Os05t0550300-01	Rice	extracellular	30.3	31.91
TraesCS3B01G294800.1	Wheat	extracellular	30.3	31.25
CDY04056	Canola	extracellular	31.31	30.69
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	33.33	30.56
TraesCS1B01G394400.1	Wheat	extracellular	29.29	30.21
EES18625	Sorghum	extracellular	29.29	29.9
Zm00001d037677_P001	Maize	endoplasmic reticulum, plasma membrane	30.3	29.7
Zm00001d038913_P001	Maize	endoplasmic reticulum, extracellular	29.29	29.59
CDY70822	Canola	extracellular	30.3	29.41
TraesCS1B01G394100.1	Wheat	extracellular	28.28	29.17
TraesCS1A01G374200.1	Wheat	extracellular	28.28	29.17
TraesCS1D01G380800.1	Wheat	extracellular	28.28	29.17
HORVU1Hr1G083180.1	Barley	endoplasmic reticulum, extracellular	35.35	28.46
HORVU1Hr1G083210.1	Barley	plastid	35.35	28.23
TraesCS1B01G394500.1	Wheat	extracellular	27.27	28.12
HORVU1Hr1G083170.1	Barley	extracellular	27.27	28.12
HORVU1Hr1G083160.1	Barley	extracellular	27.27	28.12
Zm00001d038911_P001	Maize	extracellular	28.28	27.72
Os01t0691100-01	Rice	endoplasmic reticulum, extracellular, mitochondrion	34.34	27.42
TraesCS1A01G374300.1	Wheat	extracellular	26.26	27.08
TraesCS1D01G381100.1	Wheat	extracellular	26.26	27.08
AT1G43665.1	Thale cress	extracellular	33.33	26.83
TraesCS1B01G394600.1	Wheat	plastid	32.32	22.22
CDY44406	Canola	extracellular	28.28	15.14

Protein Annotations

EnsemblPlants:CDX93624	EnsemblPlantsGene:GSBRNA2T00156305001	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PFAM:PF14368	ProteinID:CDX93624
ProteinID:CDX93624.1	SignalP:SignalP-noTM	SUPFAM:SSF47699	UniParc:UPI0004EE1F5C	MapMan:35.2	:

Description

BnaA06g04240D

Coordinates

chrLK031876:+:976065..976364

Molecular Weight (calculated)

10362.6 Da

IEP (calculated)

7.574

GRAVY (calculated)

0.339

Length

99 amino acids

Sequence
(BLAST)

1: MKFTGAICIS FVIALVSSLA WTDATVEEGI KVACVPAELK PCTPAGLTGS NPSTECCGKL KEQESCLCSY MKNPAFGHCF KTPNAHKVIA ACSVAYPAC

Best Arabidopsis Sequence Match ( AT5G38160.1 )
(BLAST)

001: MKFTGVVFIL FVLGTMLSPV PVKARVVKGS GEEVNVTCDA TQLSSCVTAV STGAPPSTDC CGKLKEHETC LCTYIQNPLY SSYVTSPNAR KTLAACDVAY
101: PTC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF40]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.